Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CXCL5P42830 PHGDH-209ENST00000641074 1780 ntBASIC12.15□□□□□ -0.46
CXCL5P42830 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL5P42830 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
CXCL5P42830 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CXCL5P42830 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
CXCL5P42830 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CXCL5P42830 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CXCL5P42830 KRT8P7-201ENST00000533003 1432 ntBASIC12.15□□□□□ -0.46
CXCL5P42830 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL5P42830 KRT8P50-201ENST00000562022 1438 ntBASIC12.15□□□□□ -0.46
CXCL5P42830 AC008894.3-201ENST00000624324 3103 ntBASIC12.15□□□□□ -0.46
CXCL5P42830 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CXCL5P42830 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CXCL5P42830 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL5P42830 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
CXCL5P42830 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.15□□□□□ -0.46
CXCL5P42830 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL5P42830 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.15□□□□□ -0.46
CXCL5P42830 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CXCL5P42830 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.15□□□□□ -0.46
CXCL5P42830 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CXCL5P42830 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CXCL5P42830 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
CXCL5P42830 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL5P42830 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CXCL5P42830 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CXCL5P42830 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
CXCL5P42830 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CXCL5P42830 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
CXCL5P42830 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CXCL5P42830 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.14□□□□□ -0.47
CXCL5P42830 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CXCL5P42830 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.14□□□□□ -0.47
CXCL5P42830 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CXCL5P42830 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.14□□□□□ -0.47
CXCL5P42830 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.14□□□□□ -0.47
CXCL5P42830 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.14□□□□□ -0.47
CXCL5P42830 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.14□□□□□ -0.47
CXCL5P42830 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CXCL5P42830 AC104771.1-201ENST00000603335 964 ntBASIC12.14□□□□□ -0.47
CXCL5P42830 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.14□□□□□ -0.47
CXCL5P42830 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CXCL5P42830 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CXCL5P42830 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 FSCN1P1-201ENST00000568912 1481 ntBASIC12.14□□□□□ -0.47
CXCL5P42830 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CXCL5P42830 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL5P42830 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CXCL5P42830 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CXCL5P42830 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CXCL5P42830 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CXCL5P42830 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CXCL5P42830 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CXCL5P42830 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CXCL5P42830 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CXCL5P42830 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CXCL5P42830 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.13□□□□□ -0.47
CXCL5P42830 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CXCL5P42830 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.13□□□□□ -0.47
CXCL5P42830 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CXCL5P42830 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CXCL5P42830 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms