Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
TNFSF9P41273 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFSF9P41273 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TNFSF9P41273 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF9P41273 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF9P41273 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF9P41273 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFSF9P41273 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF9P41273 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFSF9P41273 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF9P41273 AL390961.4-201ENST00000623958 2535 ntBASIC19.43■□□□□ 0.7
TNFSF9P41273 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF9P41273 AC007613.1-201ENST00000572811 2597 ntBASIC19.42■□□□□ 0.7
TNFSF9P41273 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF9P41273 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TNFSF9P41273 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF9P41273 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF9P41273 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF9P41273 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF9P41273 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TNFSF9P41273 AL450487.1-201ENST00000426799 995 ntBASIC19.42■□□□□ 0.7
TNFSF9P41273 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.42■□□□□ 0.7
TNFSF9P41273 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.42■□□□□ 0.7
TNFSF9P41273 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.42■□□□□ 0.7
TNFSF9P41273 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.42■□□□□ 0.7
TNFSF9P41273 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.42■□□□□ 0.7
TNFSF9P41273 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF9P41273 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFSF9P41273 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.42■□□□□ 0.7
TNFSF9P41273 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TNFSF9P41273 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.42■□□□□ 0.7
TNFSF9P41273 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TNFSF9P41273 AC022898.2-201ENST00000616822 1312 ntBASIC19.42■□□□□ 0.7
TNFSF9P41273 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF9P41273 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.42■□□□□ 0.7
TNFSF9P41273 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF9P41273 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
TNFSF9P41273 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF9P41273 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TNFSF9P41273 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 FLJ13224-201ENST00000313737 1514 ntBASIC19.41■□□□□ 0.7
TNFSF9P41273 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 KRT18P31-201ENST00000506277 1292 ntBASIC19.41■□□□□ 0.7
TNFSF9P41273 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.41■□□□□ 0.7
TNFSF9P41273 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.41■□□□□ 0.7
TNFSF9P41273 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TNFSF9P41273 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.41■□□□□ 0.7
TNFSF9P41273 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.41■□□□□ 0.7
TNFSF9P41273 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF9P41273 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TNFSF9P41273 TP73-AS1-210ENST00000637775 1455 ntBASIC19.41■□□□□ 0.7
TNFSF9P41273 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TNFSF9P41273 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFSF9P41273 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF9P41273 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.4■□□□□ 0.7
TNFSF9P41273 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFSF9P41273 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.4■□□□□ 0.7
TNFSF9P41273 RCN1P2-201ENST00000398357 915 ntBASIC19.4■□□□□ 0.7
TNFSF9P41273 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.4■□□□□ 0.7
TNFSF9P41273 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFSF9P41273 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.4■□□□□ 0.7
TNFSF9P41273 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TNFSF9P41273 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFSF9P41273 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF9P41273 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TNFSF9P41273 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF9P41273 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TNFSF9P41273 AC010460.3-201ENST00000511359 1579 ntBASIC19.4■□□□□ 0.7
TNFSF9P41273 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF9P41273 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms