Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 AC093010.1-201ENST00000473625 1624 ntBASIC22.66■■□□□ 1.22
COL15A1P39059 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 AC023274.1-201ENST00000418278 595 ntBASIC22.66■■□□□ 1.22
COL15A1P39059 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.66■■□□□ 1.22
COL15A1P39059 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.66■■□□□ 1.22
COL15A1P39059 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 AC006557.2-201ENST00000592985 1240 ntBASIC22.66■■□□□ 1.22
COL15A1P39059 AL355385.1-201ENST00000606123 409 ntBASIC22.66■■□□□ 1.22
COL15A1P39059 MIR1199-201ENST00000621445 119 ntBASIC22.66■■□□□ 1.22
COL15A1P39059 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.66■■□□□ 1.22
COL15A1P39059 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 SIGLEC16-201ENST00000599858 1437 ntBASIC22.66■■□□□ 1.22
COL15A1P39059 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.66■■□□□ 1.22
COL15A1P39059 KRT8P47-201ENST00000604727 1398 ntBASIC22.66■■□□□ 1.22
COL15A1P39059 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL15A1P39059 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.65■■□□□ 1.22
COL15A1P39059 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.65■■□□□ 1.22
COL15A1P39059 AC122714.2-201ENST00000502787 707 ntBASIC22.65■■□□□ 1.22
COL15A1P39059 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.65■■□□□ 1.22
COL15A1P39059 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.65■■□□□ 1.22
COL15A1P39059 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.65■■□□□ 1.22
COL15A1P39059 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
COL15A1P39059 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
COL15A1P39059 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 WIZP1-201ENST00000531444 2299 ntBASIC22.65■■□□□ 1.22
COL15A1P39059 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.65■■□□□ 1.22
COL15A1P39059 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.65■■□□□ 1.22
COL15A1P39059 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.65■■□□□ 1.22
COL15A1P39059 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL15A1P39059 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL15A1P39059 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
COL15A1P39059 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL15A1P39059 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL15A1P39059 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL15A1P39059 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
COL15A1P39059 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
COL15A1P39059 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.64■■□□□ 1.22
COL15A1P39059 AC108751.1-201ENST00000490852 363 ntBASIC22.64■■□□□ 1.22
COL15A1P39059 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.64■■□□□ 1.22
COL15A1P39059 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.64■■□□□ 1.22
COL15A1P39059 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.64■■□□□ 1.22
COL15A1P39059 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.64■■□□□ 1.22
COL15A1P39059 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.64■■□□□ 1.22
COL15A1P39059 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL15A1P39059 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC22.64■■□□□ 1.22
COL15A1P39059 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL15A1P39059 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL15A1P39059 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.64■■□□□ 1.21
COL15A1P39059 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.64■■□□□ 1.21
COL15A1P39059 AC004817.3-201ENST00000602957 2129 ntBASIC22.64■■□□□ 1.21
COL15A1P39059 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.64■■□□□ 1.21
COL15A1P39059 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.63■■□□□ 1.21
COL15A1P39059 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.63■■□□□ 1.21
COL15A1P39059 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.63■■□□□ 1.21
COL15A1P39059 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.63■■□□□ 1.21
COL15A1P39059 SPDYE21P-201ENST00000413323 827 ntBASIC22.63■■□□□ 1.21
COL15A1P39059 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.63■■□□□ 1.21
COL15A1P39059 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
COL15A1P39059 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.63■■□□□ 1.21
COL15A1P39059 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
COL15A1P39059 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.63■■□□□ 1.21
COL15A1P39059 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.63■■□□□ 1.21
COL15A1P39059 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.63■■□□□ 1.21
COL15A1P39059 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
COL15A1P39059 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.63■■□□□ 1.21
COL15A1P39059 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
COL15A1P39059 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.63■■□□□ 1.21
COL15A1P39059 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.63■■□□□ 1.21
COL15A1P39059 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL15A1P39059 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
COL15A1P39059 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL15A1P39059 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.63■■□□□ 1.21
COL15A1P39059 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL15A1P39059 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.62■■□□□ 1.21
COL15A1P39059 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.62■■□□□ 1.21
COL15A1P39059 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms