Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.47■□□□□ 0.87
CLCN1P35523 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLCN1P35523 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCN1P35523 AL445675.2-201ENST00000620291 557 ntBASIC20.47■□□□□ 0.87
CLCN1P35523 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.47■□□□□ 0.87
CLCN1P35523 HCG11-201ENST00000411553 5696 ntBASIC20.47■□□□□ 0.87
CLCN1P35523 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CLCN1P35523 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCN1P35523 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCN1P35523 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCN1P35523 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCN1P35523 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLCN1P35523 KRT18P29-201ENST00000397031 1267 ntBASIC20.46■□□□□ 0.87
CLCN1P35523 NIFKP9-201ENST00000419265 221 ntBASIC20.46■□□□□ 0.87
CLCN1P35523 RPS2P4-201ENST00000476944 856 ntBASIC20.46■□□□□ 0.87
CLCN1P35523 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCN1P35523 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.46■□□□□ 0.87
CLCN1P35523 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CLCN1P35523 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCN1P35523 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCN1P35523 AL353708.3-201ENST00000610272 989 ntBASIC20.46■□□□□ 0.87
CLCN1P35523 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLCN1P35523 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCN1P35523 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCN1P35523 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCN1P35523 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CLCN1P35523 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CLCN1P35523 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CLCN1P35523 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.45■□□□□ 0.86
CLCN1P35523 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLCN1P35523 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLCN1P35523 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLCN1P35523 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 TSPY23P-201ENST00000440136 739 ntBASIC20.45■□□□□ 0.86
CLCN1P35523 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.45■□□□□ 0.86
CLCN1P35523 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.45■□□□□ 0.86
CLCN1P35523 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.45■□□□□ 0.86
CLCN1P35523 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.45■□□□□ 0.86
CLCN1P35523 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.45■□□□□ 0.86
CLCN1P35523 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CLCN1P35523 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.45■□□□□ 0.86
CLCN1P35523 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.45■□□□□ 0.86
CLCN1P35523 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.45■□□□□ 0.86
CLCN1P35523 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCN1P35523 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCN1P35523 AC007950.2-201ENST00000615045 2347 ntBASIC20.44■□□□□ 0.86
CLCN1P35523 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCN1P35523 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.44■□□□□ 0.86
CLCN1P35523 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CLCN1P35523 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLCN1P35523 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.44■□□□□ 0.86
CLCN1P35523 AC004980.1-204ENST00000429707 299 ntBASIC20.44■□□□□ 0.86
CLCN1P35523 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.44■□□□□ 0.86
CLCN1P35523 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.44■□□□□ 0.86
CLCN1P35523 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CLCN1P35523 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCN1P35523 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCN1P35523 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
CLCN1P35523 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CLCN1P35523 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCN1P35523 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCN1P35523 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCN1P35523 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms