Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNNA1P35221 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNNA1P35221 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNNA1P35221 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19■□□□□ 0.63
CTNNA1P35221 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19■□□□□ 0.63
CTNNA1P35221 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19■□□□□ 0.63
CTNNA1P35221 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19■□□□□ 0.63
CTNNA1P35221 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNNA1P35221 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNNA1P35221 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNNA1P35221 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CTNNA1P35221 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNNA1P35221 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNNA1P35221 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CTNNA1P35221 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CTNNA1P35221 AC124067.4-201ENST00000519691 2379 ntBASIC18.99■□□□□ 0.63
CTNNA1P35221 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNNA1P35221 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.99■□□□□ 0.63
CTNNA1P35221 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.99■□□□□ 0.63
CTNNA1P35221 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNNA1P35221 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CTNNA1P35221 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.99■□□□□ 0.63
CTNNA1P35221 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTNNA1P35221 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.99■□□□□ 0.63
CTNNA1P35221 AL355075.4-201ENST00000554988 638 ntBASIC18.99■□□□□ 0.63
CTNNA1P35221 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTNNA1P35221 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTNNA1P35221 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTNNA1P35221 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTNNA1P35221 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.98■□□□□ 0.63
CTNNA1P35221 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 AC132938.6-201ENST00000623828 1655 ntBASIC18.98■□□□□ 0.63
CTNNA1P35221 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CTNNA1P35221 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CTNNA1P35221 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.98■□□□□ 0.63
CTNNA1P35221 SEC1P-202ENST00000473944 940 ntBASIC18.98■□□□□ 0.63
CTNNA1P35221 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNNA1P35221 DUTP2-201ENST00000519164 463 ntBASIC18.98■□□□□ 0.63
CTNNA1P35221 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.98■□□□□ 0.63
CTNNA1P35221 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.98■□□□□ 0.63
CTNNA1P35221 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTNNA1P35221 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.98■□□□□ 0.63
CTNNA1P35221 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNNA1P35221 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CTNNA1P35221 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNNA1P35221 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNNA1P35221 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNNA1P35221 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.97■□□□□ 0.63
CTNNA1P35221 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 INGX-201ENST00000359239 846 ntBASIC18.97■□□□□ 0.63
CTNNA1P35221 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CTNNA1P35221 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.97■□□□□ 0.63
CTNNA1P35221 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.97■□□□□ 0.63
CTNNA1P35221 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.97■□□□□ 0.63
CTNNA1P35221 EGLN1P1-201ENST00000531623 762 ntBASIC18.97■□□□□ 0.63
CTNNA1P35221 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.97■□□□□ 0.63
CTNNA1P35221 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.97■□□□□ 0.63
CTNNA1P35221 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.97■□□□□ 0.63
CTNNA1P35221 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTNNA1P35221 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.97■□□□□ 0.63
CTNNA1P35221 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CTNNA1P35221 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CTNNA1P35221 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNNA1P35221 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms