Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
CKS2P33552 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS2P33552 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CKS2P33552 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS2P33552 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CKS2P33552 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CKS2P33552 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS2P33552 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 AL355312.1-201ENST00000407115 2176 ntBASIC13.24□□□□□ -0.29
CKS2P33552 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.24□□□□□ -0.29
CKS2P33552 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 POU5F1P3-201ENST00000428824 1078 ntBASIC13.24□□□□□ -0.29
CKS2P33552 AC006015.1-201ENST00000429970 570 ntBASIC13.24□□□□□ -0.29
CKS2P33552 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CKS2P33552 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.24□□□□□ -0.29
CKS2P33552 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CKS2P33552 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 AC092437.1-201ENST00000624794 1048 ntBASIC13.24□□□□□ -0.29
CKS2P33552 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.24□□□□□ -0.29
CKS2P33552 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CKS2P33552 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS2P33552 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS2P33552 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS2P33552 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CKS2P33552 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS2P33552 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS2P33552 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 AL138688.1-201ENST00000624851 1594 ntBASIC13.24□□□□□ -0.29
CKS2P33552 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.24□□□□□ -0.29
CKS2P33552 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS2P33552 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.23□□□□□ -0.29
CKS2P33552 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CKS2P33552 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.23□□□□□ -0.29
CKS2P33552 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CKS2P33552 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 DUSP5P2-201ENST00000426873 1033 ntBASIC13.23□□□□□ -0.29
CKS2P33552 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.23□□□□□ -0.29
CKS2P33552 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.23□□□□□ -0.29
CKS2P33552 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.23□□□□□ -0.29
CKS2P33552 PRSS44-201ENST00000515154 1146 ntBASIC13.23□□□□□ -0.29
CKS2P33552 AF201337.1-201ENST00000520239 748 ntBASIC13.23□□□□□ -0.29
CKS2P33552 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.23□□□□□ -0.29
CKS2P33552 AC105036.2-201ENST00000569468 176 ntBASIC13.23□□□□□ -0.29
CKS2P33552 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.23□□□□□ -0.29
CKS2P33552 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
CKS2P33552 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
CKS2P33552 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.23□□□□□ -0.29
CKS2P33552 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.23□□□□□ -0.29
CKS2P33552 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.23□□□□□ -0.29
CKS2P33552 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CKS2P33552 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CKS2P33552 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS2P33552 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.23□□□□□ -0.29
CKS2P33552 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms