Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CHRNA3P32297 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CHRNA3P32297 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHRNA3P32297 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHRNA3P32297 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA3P32297 AC093010.1-201ENST00000473625 1624 ntBASIC18.96■□□□□ 0.63
CHRNA3P32297 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CHRNA3P32297 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CHRNA3P32297 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA3P32297 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA3P32297 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHRNA3P32297 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.96■□□□□ 0.63
CHRNA3P32297 AL359075.1-203ENST00000462729 1002 ntBASIC18.96■□□□□ 0.63
CHRNA3P32297 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.96■□□□□ 0.63
CHRNA3P32297 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA3P32297 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CHRNA3P32297 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.96■□□□□ 0.63
CHRNA3P32297 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHRNA3P32297 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA3P32297 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.96■□□□□ 0.63
CHRNA3P32297 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA3P32297 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA3P32297 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA3P32297 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHRNA3P32297 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNA3P32297 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNA3P32297 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CHRNA3P32297 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.95■□□□□ 0.62
CHRNA3P32297 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNA3P32297 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNA3P32297 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNA3P32297 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.95■□□□□ 0.62
CHRNA3P32297 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA3P32297 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHRNA3P32297 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA3P32297 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA3P32297 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHRNA3P32297 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA3P32297 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA3P32297 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA3P32297 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNA3P32297 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA3P32297 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHRNA3P32297 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNA3P32297 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.94■□□□□ 0.62
CHRNA3P32297 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA3P32297 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.94■□□□□ 0.62
CHRNA3P32297 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.94■□□□□ 0.62
CHRNA3P32297 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.94■□□□□ 0.62
CHRNA3P32297 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA3P32297 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA3P32297 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHRNA3P32297 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA3P32297 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CHRNA3P32297 OR6D1P-202ENST00000641007 5290 ntBASIC18.94■□□□□ 0.62
CHRNA3P32297 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA3P32297 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms