Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC8P31273 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC8P31273 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
HOXC8P31273 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
HOXC8P31273 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC8P31273 ELK2BP-201ENST00000415014 1224 ntBASIC19.49■□□□□ 0.71
HOXC8P31273 AC108751.1-201ENST00000490852 363 ntBASIC19.49■□□□□ 0.71
HOXC8P31273 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.49■□□□□ 0.71
HOXC8P31273 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC8P31273 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC8P31273 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HOXC8P31273 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC8P31273 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HOXC8P31273 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC8P31273 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXC8P31273 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC8P31273 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC8P31273 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HOXC8P31273 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
HOXC8P31273 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HOXC8P31273 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXC8P31273 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.48■□□□□ 0.71
HOXC8P31273 AC003669.1-201ENST00000334569 611 ntBASIC19.48■□□□□ 0.71
HOXC8P31273 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXC8P31273 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXC8P31273 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.48■□□□□ 0.71
HOXC8P31273 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXC8P31273 AC010327.4-202ENST00000591484 748 ntBASIC19.48■□□□□ 0.71
HOXC8P31273 AC064836.3-201ENST00000607928 673 ntBASIC19.48■□□□□ 0.71
HOXC8P31273 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXC8P31273 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HOXC8P31273 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXC8P31273 AC006504.4-201ENST00000592118 1568 ntBASIC19.48■□□□□ 0.71
HOXC8P31273 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HOXC8P31273 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC8P31273 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HOXC8P31273 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.47■□□□□ 0.71
HOXC8P31273 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC8P31273 AC100803.2-201ENST00000562459 1963 ntBASIC19.47■□□□□ 0.71
HOXC8P31273 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HOXC8P31273 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HOXC8P31273 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC8P31273 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HOXC8P31273 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC8P31273 DNAJB3-201ENST00000446806 729 ntBASIC19.47■□□□□ 0.71
HOXC8P31273 AC112482.1-201ENST00000492080 688 ntBASIC19.47■□□□□ 0.71
HOXC8P31273 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.47■□□□□ 0.71
HOXC8P31273 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXC8P31273 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC8P31273 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 PKD1P6-201ENST00000343738 4769 ntBASIC19.47■□□□□ 0.71
HOXC8P31273 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC8P31273 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 AC018445.3-201ENST00000624177 1945 ntBASIC19.47■□□□□ 0.71
HOXC8P31273 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC8P31273 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC8P31273 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC8P31273 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC8P31273 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HOXC8P31273 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC8P31273 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC8P31273 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC8P31273 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC8P31273 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
HOXC8P31273 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC8P31273 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC8P31273 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC8P31273 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC8P31273 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC8P31273 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC8P31273 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC8P31273 NCF1C-201ENST00000438382 1427 ntBASIC19.46■□□□□ 0.71
HOXC8P31273 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC8P31273 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HOXC8P31273 DDX43P3-201ENST00000441064 443 ntBASIC19.46■□□□□ 0.71
HOXC8P31273 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms