Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.47■□□□□ 0.07
CD40P25942 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.47■□□□□ 0.07
CD40P25942 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CD40P25942 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CD40P25942 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.47■□□□□ 0.07
CD40P25942 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 FDX1P1-201ENST00000449115 551 ntBASIC15.47■□□□□ 0.07
CD40P25942 AC132008.2-207ENST00000454517 770 ntBASIC15.47■□□□□ 0.07
CD40P25942 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.47■□□□□ 0.07
CD40P25942 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.47■□□□□ 0.07
CD40P25942 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.47■□□□□ 0.07
CD40P25942 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.47■□□□□ 0.07
CD40P25942 AC093677.2-201ENST00000600169 1863 ntBASIC15.47■□□□□ 0.07
CD40P25942 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.47■□□□□ 0.07
CD40P25942 AC004408.2-201ENST00000623613 2777 ntBASIC15.47■□□□□ 0.07
CD40P25942 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CD40P25942 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 INTS4P1-201ENST00000438455 1935 ntBASIC15.47■□□□□ 0.07
CD40P25942 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD40P25942 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CD40P25942 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CD40P25942 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.46■□□□□ 0.07
CD40P25942 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CD40P25942 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.46■□□□□ 0.07
CD40P25942 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.46■□□□□ 0.07
CD40P25942 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.46■□□□□ 0.07
CD40P25942 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.46■□□□□ 0.07
CD40P25942 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.46■□□□□ 0.07
CD40P25942 AF238378.1-201ENST00000526806 358 ntBASIC15.46■□□□□ 0.07
CD40P25942 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.46■□□□□ 0.07
CD40P25942 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.46■□□□□ 0.07
CD40P25942 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CD40P25942 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.46■□□□□ 0.07
CD40P25942 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.46■□□□□ 0.07
CD40P25942 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.46■□□□□ 0.07
CD40P25942 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD40P25942 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD40P25942 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD40P25942 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.46■□□□□ 0.06
CD40P25942 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CD40P25942 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.46■□□□□ 0.06
CD40P25942 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD40P25942 AC135776.1-201ENST00000319817 2481 ntBASIC15.45■□□□□ 0.06
CD40P25942 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CD40P25942 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD40P25942 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CD40P25942 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
CD40P25942 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CD40P25942 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD40P25942 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.45■□□□□ 0.06
CD40P25942 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.45■□□□□ 0.06
CD40P25942 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD40P25942 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD40P25942 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.45■□□□□ 0.06
CD40P25942 AP002469.2-201ENST00000531724 424 ntBASIC15.45■□□□□ 0.06
CD40P25942 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.45■□□□□ 0.06
CD40P25942 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.45■□□□□ 0.06
CD40P25942 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.45■□□□□ 0.06
CD40P25942 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.45■□□□□ 0.06
CD40P25942 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD40P25942 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.45■□□□□ 0.06
CD40P25942 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.45■□□□□ 0.06
CD40P25942 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.45■□□□□ 0.06
CD40P25942 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.45■□□□□ 0.06
CD40P25942 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD40P25942 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD40P25942 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CD40P25942 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.45■□□□□ 0.06
CD40P25942 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD40P25942 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.45■□□□□ 0.06
CD40P25942 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms