Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
LAMA1P25391 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LAMA1P25391 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LAMA1P25391 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.48■□□□□ 0.39
LAMA1P25391 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.48■□□□□ 0.39
LAMA1P25391 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.48■□□□□ 0.39
LAMA1P25391 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 HLA-J-202ENST00000469281 1241 ntBASIC17.48■□□□□ 0.39
LAMA1P25391 BX005266.1-201ENST00000473402 457 ntBASIC17.48■□□□□ 0.39
LAMA1P25391 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.48■□□□□ 0.39
LAMA1P25391 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.48■□□□□ 0.39
LAMA1P25391 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.48■□□□□ 0.39
LAMA1P25391 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LAMA1P25391 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.48■□□□□ 0.39
LAMA1P25391 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 SIRPAP1-201ENST00000448467 1770 ntBASIC17.48■□□□□ 0.39
LAMA1P25391 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.48■□□□□ 0.39
LAMA1P25391 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.48■□□□□ 0.39
LAMA1P25391 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 AC100803.2-201ENST00000562459 1963 ntBASIC17.48■□□□□ 0.39
LAMA1P25391 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LAMA1P25391 GPR89P-201ENST00000407924 1495 ntBASIC17.48■□□□□ 0.39
LAMA1P25391 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LAMA1P25391 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LAMA1P25391 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.47■□□□□ 0.39
LAMA1P25391 KRT18P65-201ENST00000439811 1286 ntBASIC17.47■□□□□ 0.39
LAMA1P25391 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.47■□□□□ 0.39
LAMA1P25391 SNHG9-202ENST00000564014 471 ntBASIC17.47■□□□□ 0.39
LAMA1P25391 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.47■□□□□ 0.39
LAMA1P25391 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.47■□□□□ 0.39
LAMA1P25391 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.47■□□□□ 0.39
LAMA1P25391 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.47■□□□□ 0.39
LAMA1P25391 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.47■□□□□ 0.39
LAMA1P25391 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
LAMA1P25391 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.47■□□□□ 0.39
LAMA1P25391 COX20P2-201ENST00000452636 358 ntBASIC17.47■□□□□ 0.39
LAMA1P25391 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.47■□□□□ 0.39
LAMA1P25391 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 KRT8P47-201ENST00000604727 1398 ntBASIC17.47■□□□□ 0.39
LAMA1P25391 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LAMA1P25391 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LAMA1P25391 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.46■□□□□ 0.39
LAMA1P25391 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 AC109322.1-201ENST00000524499 1264 ntBASIC17.46■□□□□ 0.39
LAMA1P25391 KRT19P2-202ENST00000557173 1012 ntBASIC17.46■□□□□ 0.39
LAMA1P25391 AC005498.2-205ENST00000593218 784 ntBASIC17.46■□□□□ 0.39
LAMA1P25391 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.46■□□□□ 0.39
LAMA1P25391 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.46■□□□□ 0.39
LAMA1P25391 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LAMA1P25391 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.46■□□□□ 0.39
LAMA1P25391 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.46■□□□□ 0.39
LAMA1P25391 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LAMA1P25391 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.46■□□□□ 0.39
LAMA1P25391 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.46■□□□□ 0.39
LAMA1P25391 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.46■□□□□ 0.39
LAMA1P25391 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LAMA1P25391 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.46■□□□□ 0.39
LAMA1P25391 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LAMA1P25391 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LAMA1P25391 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
LAMA1P25391 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.46■□□□□ 0.38
LAMA1P25391 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LAMA1P25391 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LAMA1P25391 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms