Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.09■□□□□ 0.49
VCLP18206 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 VENTXP5-201ENST00000523979 775 ntBASIC18.09■□□□□ 0.49
VCLP18206 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.09■□□□□ 0.49
VCLP18206 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.09■□□□□ 0.49
VCLP18206 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VCLP18206 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VCLP18206 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
VCLP18206 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCLP18206 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCLP18206 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.08■□□□□ 0.49
VCLP18206 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.08■□□□□ 0.49
VCLP18206 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.08■□□□□ 0.49
VCLP18206 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.08■□□□□ 0.49
VCLP18206 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCLP18206 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VCLP18206 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VCLP18206 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCLP18206 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCLP18206 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCLP18206 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCLP18206 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.08■□□□□ 0.48
VCLP18206 AL136038.3-201ENST00000561909 1096 ntBASIC18.08■□□□□ 0.48
VCLP18206 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCLP18206 AC008687.5-201ENST00000593746 558 ntBASIC18.08■□□□□ 0.48
VCLP18206 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.08■□□□□ 0.48
VCLP18206 HYMAI.1-201ENST00000620949 238 ntBASIC18.08■□□□□ 0.48
VCLP18206 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCLP18206 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
VCLP18206 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.08■□□□□ 0.48
VCLP18206 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCLP18206 LINC00896-202ENST00000609602 2128 ntBASIC18.08■□□□□ 0.48
VCLP18206 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCLP18206 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.08■□□□□ 0.48
VCLP18206 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VCLP18206 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VCLP18206 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.08■□□□□ 0.48
VCLP18206 AL391807.1-203ENST00000604392 2365 ntBASIC18.08■□□□□ 0.48
VCLP18206 AC009102.3-201ENST00000623118 1491 ntBASIC18.07■□□□□ 0.48
VCLP18206 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
VCLP18206 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
VCLP18206 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.07■□□□□ 0.48
VCLP18206 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.07■□□□□ 0.48
VCLP18206 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.07■□□□□ 0.48
VCLP18206 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 AC092597.1-201ENST00000487352 616 ntBASIC18.07■□□□□ 0.48
VCLP18206 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.07■□□□□ 0.48
VCLP18206 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.07■□□□□ 0.48
VCLP18206 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VCLP18206 AC083849.1-201ENST00000615227 514 ntBASIC18.07■□□□□ 0.48
VCLP18206 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.07■□□□□ 0.48
VCLP18206 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.07■□□□□ 0.48
VCLP18206 PCDHA12-202ENST00000613593 2588 ntBASIC18.07■□□□□ 0.48
VCLP18206 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 SIRPAP1-201ENST00000448467 1770 ntBASIC18.07■□□□□ 0.48
VCLP18206 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCLP18206 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.06■□□□□ 0.48
VCLP18206 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
VCLP18206 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VCLP18206 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
VCLP18206 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
VCLP18206 HLA-F-220ENST00000434407 884 ntBASIC18.06■□□□□ 0.48
VCLP18206 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.06■□□□□ 0.48
VCLP18206 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCLP18206 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms