Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CFTRP13569 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CFTRP13569 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC30.54■■■□□ 2.48
CFTRP13569 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CFTRP13569 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CFTRP13569 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CFTRP13569 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CFTRP13569 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
CFTRP13569 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CFTRP13569 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CFTRP13569 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC30.54■■■□□ 2.48
CFTRP13569 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC30.54■■■□□ 2.48
CFTRP13569 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CFTRP13569 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CFTRP13569 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CFTRP13569 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CFTRP13569 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CFTRP13569 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CFTRP13569 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC30.53■■■□□ 2.48
CFTRP13569 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CFTRP13569 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC30.53■■■□□ 2.48
CFTRP13569 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC30.53■■■□□ 2.48
CFTRP13569 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC30.53■■■□□ 2.48
CFTRP13569 DUTP2-201ENST00000519164 463 ntBASIC30.53■■■□□ 2.48
CFTRP13569 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC30.53■■■□□ 2.48
CFTRP13569 AC093520.2-201ENST00000561830 333 ntBASIC30.53■■■□□ 2.48
CFTRP13569 AJ011932.1-201ENST00000621707 465 ntBASIC30.53■■■□□ 2.48
CFTRP13569 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CFTRP13569 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CFTRP13569 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CFTRP13569 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CFTRP13569 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC30.52■■■□□ 2.48
CFTRP13569 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC30.52■■■□□ 2.48
CFTRP13569 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
CFTRP13569 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC30.52■■■□□ 2.48
CFTRP13569 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC30.52■■■□□ 2.48
CFTRP13569 MIR4745-201ENST00000577608 62 ntBASIC30.52■■■□□ 2.48
CFTRP13569 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC30.52■■■□□ 2.48
CFTRP13569 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
CFTRP13569 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CFTRP13569 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CFTRP13569 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CFTRP13569 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC30.52■■■□□ 2.48
CFTRP13569 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CFTRP13569 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
CFTRP13569 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC30.51■■■□□ 2.48
CFTRP13569 HLA-J-202ENST00000469281 1241 ntBASIC30.51■■■□□ 2.48
CFTRP13569 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC30.51■■■□□ 2.48
CFTRP13569 AC023141.13-201ENST00000604991 943 ntBASIC30.51■■■□□ 2.48
CFTRP13569 GGTLC5P-201ENST00000617623 998 ntBASIC30.51■■■□□ 2.48
CFTRP13569 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CFTRP13569 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CFTRP13569 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CFTRP13569 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC30.51■■■□□ 2.47
CFTRP13569 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CFTRP13569 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CFTRP13569 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CFTRP13569 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CFTRP13569 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC30.51■■■□□ 2.47
CFTRP13569 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CFTRP13569 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CFTRP13569 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC30.51■■■□□ 2.47
CFTRP13569 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CFTRP13569 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC30.5■■■□□ 2.47
CFTRP13569 SLBP-205ENST00000488267 987 ntTSL 2 BASIC30.5■■■□□ 2.47
CFTRP13569 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC30.5■■■□□ 2.47
CFTRP13569 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC30.5■■■□□ 2.47
CFTRP13569 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC30.5■■■□□ 2.47
CFTRP13569 AQP6-203ENST00000551733 849 ntTSL 3 BASIC30.5■■■□□ 2.47
CFTRP13569 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC30.5■■■□□ 2.47
CFTRP13569 STK25P1-201ENST00000585406 838 ntBASIC30.5■■■□□ 2.47
CFTRP13569 TK1-204ENST00000590430 683 ntTSL 3 BASIC30.5■■■□□ 2.47
CFTRP13569 REXO1L3P-201ENST00000622202 1288 ntBASIC30.5■■■□□ 2.47
CFTRP13569 AC018445.3-201ENST00000624177 1945 ntBASIC30.5■■■□□ 2.47
CFTRP13569 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC30.5■■■□□ 2.47
CFTRP13569 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CFTRP13569 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
CFTRP13569 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC30.5■■■□□ 2.47
CFTRP13569 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CFTRP13569 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC30.5■■■□□ 2.47
CFTRP13569 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CFTRP13569 TAF8-206ENST00000472818 719 ntTSL 2 BASIC30.5■■■□□ 2.47
CFTRP13569 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CFTRP13569 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
CFTRP13569 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CFTRP13569 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CFTRP13569 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
CFTRP13569 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CFTRP13569 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CFTRP13569 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CFTRP13569 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC30.49■■■□□ 2.47
CFTRP13569 ANO7L1-203ENST00000602586 1720 ntBASIC30.49■■■□□ 2.47
CFTRP13569 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC30.49■■■□□ 2.47
CFTRP13569 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC30.49■■■□□ 2.47
CFTRP13569 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CFTRP13569 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC30.49■■■□□ 2.47
CFTRP13569 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC30.48■■■□□ 2.47
CFTRP13569 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC30.48■■■□□ 2.47
CFTRP13569 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CFTRP13569 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms