Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.3■□□□□ 0.84
COL11A1P12107 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 AC132938.5-201ENST00000624980 1813 ntBASIC20.29■□□□□ 0.84
COL11A1P12107 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.29■□□□□ 0.84
COL11A1P12107 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.29■□□□□ 0.84
COL11A1P12107 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COL11A1P12107 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL11A1P12107 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A1P12107 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COL11A1P12107 AC023274.1-201ENST00000418278 595 ntBASIC20.29■□□□□ 0.84
COL11A1P12107 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.29■□□□□ 0.84
COL11A1P12107 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.29■□□□□ 0.84
COL11A1P12107 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.29■□□□□ 0.84
COL11A1P12107 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.29■□□□□ 0.84
COL11A1P12107 AL022326.1-202ENST00000641533 845 ntBASIC20.29■□□□□ 0.84
COL11A1P12107 TNXA-203ENST00000507684 2038 ntBASIC20.29■□□□□ 0.84
COL11A1P12107 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL11A1P12107 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.29■□□□□ 0.84
COL11A1P12107 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.29■□□□□ 0.84
COL11A1P12107 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.29■□□□□ 0.84
COL11A1P12107 BX276092.7-203ENST00000637198 1536 ntBASIC20.29■□□□□ 0.84
COL11A1P12107 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.29■□□□□ 0.84
COL11A1P12107 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL11A1P12107 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.28■□□□□ 0.84
COL11A1P12107 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 DDX43P3-201ENST00000441064 443 ntBASIC20.28■□□□□ 0.84
COL11A1P12107 RNA5SP416-201ENST00000516838 111 ntBASIC20.28■□□□□ 0.84
COL11A1P12107 AC018845.2-201ENST00000568326 409 ntBASIC20.28■□□□□ 0.84
COL11A1P12107 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.28■□□□□ 0.84
COL11A1P12107 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COL11A1P12107 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.28■□□□□ 0.84
COL11A1P12107 AC006504.4-201ENST00000592118 1568 ntBASIC20.28■□□□□ 0.84
COL11A1P12107 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.28■□□□□ 0.84
COL11A1P12107 AC002310.6-201ENST00000624451 1377 ntBASIC20.28■□□□□ 0.84
COL11A1P12107 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A1P12107 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A1P12107 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL11A1P12107 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A1P12107 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL11A1P12107 AC005104.2-201ENST00000427818 678 ntBASIC20.27■□□□□ 0.84
COL11A1P12107 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.27■□□□□ 0.84
COL11A1P12107 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.27■□□□□ 0.84
COL11A1P12107 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.27■□□□□ 0.84
COL11A1P12107 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.27■□□□□ 0.84
COL11A1P12107 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.27■□□□□ 0.84
COL11A1P12107 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A1P12107 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.27■□□□□ 0.84
COL11A1P12107 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.27■□□□□ 0.84
COL11A1P12107 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.27■□□□□ 0.84
COL11A1P12107 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A1P12107 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.27■□□□□ 0.84
COL11A1P12107 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.27■□□□□ 0.84
COL11A1P12107 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.27■□□□□ 0.84
COL11A1P12107 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.27■□□□□ 0.84
COL11A1P12107 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.27■□□□□ 0.84
COL11A1P12107 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.27■□□□□ 0.84
COL11A1P12107 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL11A1P12107 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL11A1P12107 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL11A1P12107 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.26■□□□□ 0.83
COL11A1P12107 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.26■□□□□ 0.83
COL11A1P12107 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL11A1P12107 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.26■□□□□ 0.83
COL11A1P12107 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COL11A1P12107 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
COL11A1P12107 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A1P12107 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COL11A1P12107 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COL11A1P12107 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COL11A1P12107 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A1P12107 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms