Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CD28P10747 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.05□□□□□ -0.16
CD28P10747 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 AC004408.2-201ENST00000623613 2777 ntBASIC14.05□□□□□ -0.16
CD28P10747 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 AL590627.1-203ENST00000421194 1026 ntBASIC14.05□□□□□ -0.16
CD28P10747 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD28P10747 MTCL1P1-201ENST00000446207 792 ntBASIC14.05□□□□□ -0.16
CD28P10747 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.05□□□□□ -0.16
CD28P10747 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.05□□□□□ -0.16
CD28P10747 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.05□□□□□ -0.16
CD28P10747 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.05□□□□□ -0.16
CD28P10747 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 AC064862.7-201ENST00000604520 867 ntBASIC14.05□□□□□ -0.16
CD28P10747 AC008608.2-201ENST00000606089 416 ntBASIC14.05□□□□□ -0.16
CD28P10747 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.05□□□□□ -0.16
CD28P10747 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.05□□□□□ -0.16
CD28P10747 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.05□□□□□ -0.16
CD28P10747 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CD28P10747 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.05□□□□□ -0.16
CD28P10747 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.05□□□□□ -0.16
CD28P10747 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD28P10747 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.05□□□□□ -0.16
CD28P10747 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD28P10747 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
CD28P10747 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.04□□□□□ -0.16
CD28P10747 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.04□□□□□ -0.16
CD28P10747 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.04□□□□□ -0.16
CD28P10747 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD28P10747 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.04□□□□□ -0.16
CD28P10747 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.04□□□□□ -0.16
CD28P10747 AP001005.1-201ENST00000571755 1248 ntBASIC14.04□□□□□ -0.16
CD28P10747 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.04□□□□□ -0.16
CD28P10747 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.04□□□□□ -0.16
CD28P10747 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD28P10747 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.04□□□□□ -0.16
CD28P10747 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CD28P10747 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD28P10747 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CD28P10747 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD28P10747 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CD28P10747 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD28P10747 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CD28P10747 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.03□□□□□ -0.16
CD28P10747 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.03□□□□□ -0.16
CD28P10747 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.03□□□□□ -0.16
CD28P10747 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.03□□□□□ -0.16
CD28P10747 AL773604.1-201ENST00000617417 272 ntBASIC14.03□□□□□ -0.16
CD28P10747 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.03□□□□□ -0.16
CD28P10747 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms