Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 AP002383.4-201ENST00000442518 975 ntBASIC17.07■□□□□ 0.32
ZNF888P0CJ79 MTCL1P1-201ENST00000446207 792 ntBASIC17.07■□□□□ 0.32
ZNF888P0CJ79 AC112698.1-201ENST00000510299 916 ntBASIC17.07■□□□□ 0.32
ZNF888P0CJ79 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 AC100803.2-201ENST00000562459 1963 ntBASIC17.07■□□□□ 0.32
ZNF888P0CJ79 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 AC018470.1-201ENST00000624790 3129 ntBASIC17.07■□□□□ 0.32
ZNF888P0CJ79 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF888P0CJ79 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 AP002414.4-201ENST00000589764 1148 ntBASIC17.06■□□□□ 0.32
ZNF888P0CJ79 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF888P0CJ79 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 AC092119.3-201ENST00000612618 583 ntBASIC17.05■□□□□ 0.32
ZNF888P0CJ79 NPAP1P7-201ENST00000613027 823 ntBASIC17.05■□□□□ 0.32
ZNF888P0CJ79 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.05■□□□□ 0.32
ZNF888P0CJ79 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF888P0CJ79 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms