Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXC6P09630 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXC6P09630 AC108751.1-201ENST00000490852 363 ntBASIC20.22■□□□□ 0.83
HOXC6P09630 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXC6P09630 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXC6P09630 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXC6P09630 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.22■□□□□ 0.83
HOXC6P09630 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXC6P09630 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXC6P09630 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXC6P09630 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXC6P09630 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 AIRN-201ENST00000601203 4374 ntBASIC20.22■□□□□ 0.83
HOXC6P09630 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXC6P09630 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HOXC6P09630 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HOXC6P09630 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
HOXC6P09630 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HOXC6P09630 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HOXC6P09630 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.21■□□□□ 0.83
HOXC6P09630 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.21■□□□□ 0.83
HOXC6P09630 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.21■□□□□ 0.83
HOXC6P09630 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.21■□□□□ 0.83
HOXC6P09630 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.21■□□□□ 0.83
HOXC6P09630 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXC6P09630 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC6P09630 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HOXC6P09630 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXC6P09630 GMCL1P1-201ENST00000463439 1581 ntBASIC20.21■□□□□ 0.83
HOXC6P09630 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.2■□□□□ 0.82
HOXC6P09630 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HOXC6P09630 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.2■□□□□ 0.82
HOXC6P09630 AC211486.1-202ENST00000416371 468 ntBASIC20.2■□□□□ 0.82
HOXC6P09630 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.2■□□□□ 0.82
HOXC6P09630 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.2■□□□□ 0.82
HOXC6P09630 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.2■□□□□ 0.82
HOXC6P09630 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 AC211476.1-201ENST00000503899 468 ntBASIC20.2■□□□□ 0.82
HOXC6P09630 YBX1P5-201ENST00000509441 847 ntBASIC20.2■□□□□ 0.82
HOXC6P09630 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.2■□□□□ 0.82
HOXC6P09630 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.2■□□□□ 0.82
HOXC6P09630 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.2■□□□□ 0.82
HOXC6P09630 AL589182.2-201ENST00000619332 1049 ntBASIC20.2■□□□□ 0.82
HOXC6P09630 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC6P09630 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
HOXC6P09630 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXC6P09630 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HOXC6P09630 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXC6P09630 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXC6P09630 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC6P09630 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC6P09630 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HOXC6P09630 AC103564.2-201ENST00000432853 1299 ntBASIC20.19■□□□□ 0.82
HOXC6P09630 KRT18P2-201ENST00000447938 1258 ntBASIC20.19■□□□□ 0.82
HOXC6P09630 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.19■□□□□ 0.82
HOXC6P09630 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC6P09630 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.19■□□□□ 0.82
HOXC6P09630 AC004817.3-201ENST00000602957 2129 ntBASIC20.19■□□□□ 0.82
HOXC6P09630 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC6P09630 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXC6P09630 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC6P09630 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
HOXC6P09630 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXC6P09630 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC6P09630 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC6P09630 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.19■□□□□ 0.82
HOXC6P09630 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HOXC6P09630 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC6P09630 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC6P09630 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms