Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.17■□□□□ 0.82
CYP3A4P08684 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.17■□□□□ 0.82
CYP3A4P08684 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CYP3A4P08684 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 SLC25A6P5-201ENST00000435663 894 ntBASIC20.17■□□□□ 0.82
CYP3A4P08684 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.17■□□□□ 0.82
CYP3A4P08684 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.17■□□□□ 0.82
CYP3A4P08684 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.17■□□□□ 0.82
CYP3A4P08684 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.17■□□□□ 0.82
CYP3A4P08684 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.17■□□□□ 0.82
CYP3A4P08684 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.17■□□□□ 0.82
CYP3A4P08684 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 RN7SL510P-201ENST00000581311 263 ntBASIC20.17■□□□□ 0.82
CYP3A4P08684 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.17■□□□□ 0.82
CYP3A4P08684 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.17■□□□□ 0.82
CYP3A4P08684 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CYP3A4P08684 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CYP3A4P08684 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP3A4P08684 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.17■□□□□ 0.82
CYP3A4P08684 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CYP3A4P08684 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.16■□□□□ 0.82
CYP3A4P08684 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CYP3A4P08684 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.16■□□□□ 0.82
CYP3A4P08684 AC009949.1-201ENST00000623048 1830 ntBASIC20.16■□□□□ 0.82
CYP3A4P08684 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
CYP3A4P08684 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.16■□□□□ 0.82
CYP3A4P08684 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 AKR1C7P-201ENST00000305623 895 ntBASIC20.16■□□□□ 0.82
CYP3A4P08684 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.16■□□□□ 0.82
CYP3A4P08684 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.16■□□□□ 0.82
CYP3A4P08684 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.16■□□□□ 0.82
CYP3A4P08684 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CYP3A4P08684 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.16■□□□□ 0.82
CYP3A4P08684 LINC01711-201ENST00000598340 967 ntBASIC20.16■□□□□ 0.82
CYP3A4P08684 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.16■□□□□ 0.82
CYP3A4P08684 REXO1L6P-202ENST00000619970 1078 ntBASIC20.16■□□□□ 0.82
CYP3A4P08684 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.16■□□□□ 0.82
CYP3A4P08684 AL691432.3-201ENST00000621860 400 ntBASIC20.16■□□□□ 0.82
CYP3A4P08684 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CYP3A4P08684 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.16■□□□□ 0.82
CYP3A4P08684 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.16■□□□□ 0.82
CYP3A4P08684 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP3A4P08684 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CYP3A4P08684 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CYP3A4P08684 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP3A4P08684 AL390961.4-201ENST00000623958 2535 ntBASIC20.15■□□□□ 0.82
CYP3A4P08684 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.15■□□□□ 0.82
CYP3A4P08684 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 AC132008.2-207ENST00000454517 770 ntBASIC20.15■□□□□ 0.82
CYP3A4P08684 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.15■□□□□ 0.82
CYP3A4P08684 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP3A4P08684 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP3A4P08684 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP3A4P08684 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CYP3A4P08684 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.15■□□□□ 0.82
CYP3A4P08684 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CYP3A4P08684 NEFHP1-201ENST00000412845 2629 ntBASIC20.15■□□□□ 0.82
CYP3A4P08684 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.15■□□□□ 0.82
CYP3A4P08684 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CYP3A4P08684 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CYP3A4P08684 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CYP3A4P08684 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms