Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 TNRC18P3-201ENST00000441896 2691 ntBASIC16.3■□□□□ 0.2
HMGN1P05114 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HMGN1P05114 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HMGN1P05114 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.3■□□□□ 0.2
HMGN1P05114 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGN1P05114 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HMGN1P05114 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HMGN1P05114 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HMGN1P05114 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGN1P05114 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 AL355312.1-201ENST00000407115 2176 ntBASIC16.29■□□□□ 0.2
HMGN1P05114 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HMGN1P05114 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.29■□□□□ 0.2
HMGN1P05114 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGN1P05114 AP003041.3-201ENST00000527151 707 ntBASIC16.29■□□□□ 0.2
HMGN1P05114 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.29■□□□□ 0.2
HMGN1P05114 AC008687.5-201ENST00000593746 558 ntBASIC16.29■□□□□ 0.2
HMGN1P05114 AL023803.3-201ENST00000615559 522 ntBASIC16.29■□□□□ 0.2
HMGN1P05114 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGN1P05114 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HMGN1P05114 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGN1P05114 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGN1P05114 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HMGN1P05114 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
HMGN1P05114 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGN1P05114 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.28■□□□□ 0.2
HMGN1P05114 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
HMGN1P05114 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HMGN1P05114 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.28■□□□□ 0.2
HMGN1P05114 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGN1P05114 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
HMGN1P05114 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 ABHD17AP1-201ENST00000358206 933 ntBASIC16.28■□□□□ 0.2
HMGN1P05114 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.28■□□□□ 0.2
HMGN1P05114 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.28■□□□□ 0.2
HMGN1P05114 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGN1P05114 AL355355.2-201ENST00000442321 338 ntBASIC16.28■□□□□ 0.2
HMGN1P05114 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HMGN1P05114 REXO1L10P-201ENST00000615707 1290 ntBASIC16.28■□□□□ 0.2
HMGN1P05114 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 REXO1L12P-201ENST00000622156 912 ntBASIC16.28■□□□□ 0.2
HMGN1P05114 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGN1P05114 AL513477.1-201ENST00000602865 2407 ntBASIC16.28■□□□□ 0.2
HMGN1P05114 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGN1P05114 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HMGN1P05114 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 AC012313.1-201ENST00000593393 3059 ntBASIC16.27■□□□□ 0.2
HMGN1P05114 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGN1P05114 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HMGN1P05114 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HMGN1P05114 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 CROCCP1-201ENST00000426910 5675 ntBASIC16.27■□□□□ 0.2
HMGN1P05114 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGN1P05114 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms