Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.71□□□□□ -0.22
TCRAP04437 NFIC-211ENST00000641145 8399 ntBASIC13.71□□□□□ -0.22
TCRAP04437 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.71□□□□□ -0.22
TCRAP04437 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.71□□□□□ -0.22
TCRAP04437 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TCRAP04437 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TCRAP04437 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRAP04437 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TCRAP04437 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TCRAP04437 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.7□□□□□ -0.22
TCRAP04437 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.7□□□□□ -0.22
TCRAP04437 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRAP04437 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRAP04437 DUTP2-201ENST00000519164 463 ntBASIC13.7□□□□□ -0.22
TCRAP04437 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TCRAP04437 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.7□□□□□ -0.22
TCRAP04437 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRAP04437 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TCRAP04437 HOXB1-202ENST00000577092 1414 ntBASIC13.7□□□□□ -0.22
TCRAP04437 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.7□□□□□ -0.22
TCRAP04437 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TCRAP04437 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TCRAP04437 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.7□□□□□ -0.22
TCRAP04437 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRAP04437 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.7□□□□□ -0.22
TCRAP04437 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TCRAP04437 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.7□□□□□ -0.22
TCRAP04437 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TCRAP04437 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.69□□□□□ -0.22
TCRAP04437 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TCRAP04437 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TCRAP04437 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 FER1L4-210ENST00000615531 5998 ntBASIC13.69□□□□□ -0.22
TCRAP04437 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.69□□□□□ -0.22
TCRAP04437 FSCN1P1-201ENST00000568912 1481 ntBASIC13.69□□□□□ -0.22
TCRAP04437 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
TCRAP04437 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRAP04437 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TCRAP04437 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.69□□□□□ -0.22
TCRAP04437 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRAP04437 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.69□□□□□ -0.22
TCRAP04437 AC009065.1-201ENST00000564055 1225 ntBASIC13.69□□□□□ -0.22
TCRAP04437 RN7SL471P-201ENST00000580476 299 ntBASIC13.69□□□□□ -0.22
TCRAP04437 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.69□□□□□ -0.22
TCRAP04437 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRAP04437 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 KRT8P7-201ENST00000533003 1432 ntBASIC13.69□□□□□ -0.22
TCRAP04437 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TCRAP04437 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRAP04437 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.69□□□□□ -0.22
TCRAP04437 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 AC096733.2-201ENST00000609937 1394 ntBASIC13.69□□□□□ -0.22
TCRAP04437 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRAP04437 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.69□□□□□ -0.22
TCRAP04437 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.69□□□□□ -0.22
TCRAP04437 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TCRAP04437 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.68□□□□□ -0.22
TCRAP04437 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TCRAP04437 AL118508.1-201ENST00000613502 2345 ntBASIC13.68□□□□□ -0.22
TCRAP04437 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.68□□□□□ -0.22
TCRAP04437 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TCRAP04437 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TCRAP04437 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms