Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD3DP04234 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD3DP04234 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD3DP04234 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CD3DP04234 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD3DP04234 AL023284.2-201ENST00000405850 579 ntBASIC15.27■□□□□ 0.04
CD3DP04234 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD3DP04234 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.27■□□□□ 0.04
CD3DP04234 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD3DP04234 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.27■□□□□ 0.04
CD3DP04234 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.27■□□□□ 0.04
CD3DP04234 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.27■□□□□ 0.04
CD3DP04234 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD3DP04234 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.27■□□□□ 0.04
CD3DP04234 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.27■□□□□ 0.04
CD3DP04234 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.27■□□□□ 0.04
CD3DP04234 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD3DP04234 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CD3DP04234 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CD3DP04234 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.27■□□□□ 0.03
CD3DP04234 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CD3DP04234 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD3DP04234 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CD3DP04234 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.26■□□□□ 0.03
CD3DP04234 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.26■□□□□ 0.03
CD3DP04234 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.26■□□□□ 0.03
CD3DP04234 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.26■□□□□ 0.03
CD3DP04234 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 PCDHA14-201ENST00000506751 2298 ntBASIC15.26■□□□□ 0.03
CD3DP04234 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.26■□□□□ 0.03
CD3DP04234 LINC01126-201ENST00000623515 1646 ntBASIC15.26■□□□□ 0.03
CD3DP04234 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.26■□□□□ 0.03
CD3DP04234 MCCD1P1-208ENST00000445732 328 ntBASIC15.26■□□□□ 0.03
CD3DP04234 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 MTDHP1-201ENST00000605323 784 ntBASIC15.26■□□□□ 0.03
CD3DP04234 AC105020.1-201ENST00000435356 2205 ntBASIC15.26■□□□□ 0.03
CD3DP04234 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CD3DP04234 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD3DP04234 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD3DP04234 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.25■□□□□ 0.03
CD3DP04234 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CD3DP04234 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CD3DP04234 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CD3DP04234 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CD3DP04234 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD3DP04234 AGGF1P2-201ENST00000426656 2106 ntBASIC15.25■□□□□ 0.03
CD3DP04234 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CD3DP04234 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CD3DP04234 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CD3DP04234 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.25■□□□□ 0.03
CD3DP04234 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.25■□□□□ 0.03
CD3DP04234 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.25■□□□□ 0.03
CD3DP04234 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 CICP6-201ENST00000457191 2729 ntBASIC15.25■□□□□ 0.03
CD3DP04234 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD3DP04234 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CD3DP04234 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms