Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC132008.2-207ENST00000454517 770 ntBASIC15.06■□□□□ 0
ABCA1O95477 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.06■□□□□ 0
ABCA1O95477 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.06■□□□□ 0
ABCA1O95477 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.06■□□□□ 0
ABCA1O95477 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.05■□□□□ 0
ABCA1O95477 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.05■□□□□ 0
ABCA1O95477 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
ABCA1O95477 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.05■□□□□ 0
ABCA1O95477 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
ABCA1O95477 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.05■□□□□ 0
ABCA1O95477 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.05■□□□□ 0
ABCA1O95477 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.05■□□□□ 0
ABCA1O95477 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.05■□□□□ 0
ABCA1O95477 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.05■□□□□ 0
ABCA1O95477 MIR5100-201ENST00000579544 119 ntBASIC15.05■□□□□ 0
ABCA1O95477 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.05■□□□□ 0
ABCA1O95477 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
ABCA1O95477 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
ABCA1O95477 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
ABCA1O95477 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
ABCA1O95477 Z98044.1-201ENST00000632503 1764 ntBASIC15.05■□□□□ 0
ABCA1O95477 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ABCA1O95477 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA1O95477 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.05■□□□□ -0
ABCA1O95477 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.05■□□□□ -0
ABCA1O95477 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.05■□□□□ -0
ABCA1O95477 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.05■□□□□ -0
ABCA1O95477 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.05■□□□□ -0
ABCA1O95477 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA1O95477 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.05■□□□□ -0
ABCA1O95477 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.05■□□□□ -0
ABCA1O95477 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.05■□□□□ -0
ABCA1O95477 RBM17P3-201ENST00000417687 1192 ntBASIC15.05■□□□□ -0
ABCA1O95477 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
ABCA1O95477 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.05■□□□□ -0
ABCA1O95477 AP001160.2-201ENST00000596071 487 ntBASIC15.05■□□□□ -0
ABCA1O95477 AL049840.3-201ENST00000602669 611 ntBASIC15.05■□□□□ -0
ABCA1O95477 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.05■□□□□ -0
ABCA1O95477 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.05■□□□□ -0
ABCA1O95477 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA1O95477 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA1O95477 AL161938.1-201ENST00000569833 2180 ntBASIC15.05■□□□□ -0
ABCA1O95477 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
ABCA1O95477 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.05■□□□□ -0
ABCA1O95477 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.05■□□□□ -0
ABCA1O95477 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.05■□□□□ -0
ABCA1O95477 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.05■□□□□ -0
ABCA1O95477 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ABCA1O95477 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.04■□□□□ -0
ABCA1O95477 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.04■□□□□ -0
ABCA1O95477 PMS2P2-201ENST00000425039 1128 ntBASIC15.04■□□□□ -0
ABCA1O95477 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.04■□□□□ -0
ABCA1O95477 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.04■□□□□ -0
ABCA1O95477 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.04■□□□□ -0
ABCA1O95477 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ABCA1O95477 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.04■□□□□ -0
ABCA1O95477 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.04■□□□□ -0
ABCA1O95477 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.04■□□□□ -0
ABCA1O95477 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.04■□□□□ -0
ABCA1O95477 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
ABCA1O95477 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.04■□□□□ -0
ABCA1O95477 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ABCA1O95477 AC138932.1-201ENST00000534164 6830 ntBASIC15.04■□□□□ -0
ABCA1O95477 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ABCA1O95477 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 YBX2P1-201ENST00000394192 760 ntBASIC15.04■□□□□ -0
ABCA1O95477 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.04■□□□□ -0
ABCA1O95477 RNA5SP415-201ENST00000517246 115 ntBASIC15.04■□□□□ -0
ABCA1O95477 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.04■□□□□ -0
ABCA1O95477 AL356488.2-201ENST00000602755 427 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms