Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RTN3O95197 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.91■□□□□ 0.62
RTN3O95197 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN3O95197 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN3O95197 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN3O95197 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN3O95197 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RTN3O95197 POM121L3P-201ENST00000419331 1163 ntBASIC18.91■□□□□ 0.62
RTN3O95197 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.91■□□□□ 0.62
RTN3O95197 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.91■□□□□ 0.62
RTN3O95197 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.91■□□□□ 0.62
RTN3O95197 KRT18P31-201ENST00000506277 1292 ntBASIC18.91■□□□□ 0.62
RTN3O95197 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.91■□□□□ 0.62
RTN3O95197 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RTN3O95197 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.91■□□□□ 0.62
RTN3O95197 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN3O95197 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.91■□□□□ 0.62
RTN3O95197 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTN3O95197 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.91■□□□□ 0.62
RTN3O95197 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN3O95197 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.91■□□□□ 0.62
RTN3O95197 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RTN3O95197 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.91■□□□□ 0.62
RTN3O95197 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTN3O95197 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
RTN3O95197 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
RTN3O95197 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN3O95197 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN3O95197 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN3O95197 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN3O95197 KRT16P4-201ENST00000453883 522 ntBASIC18.9■□□□□ 0.62
RTN3O95197 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 AC112698.1-201ENST00000510299 916 ntBASIC18.9■□□□□ 0.62
RTN3O95197 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN3O95197 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN3O95197 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN3O95197 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN3O95197 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN3O95197 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN3O95197 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN3O95197 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN3O95197 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN3O95197 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RTN3O95197 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN3O95197 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.62
RTN3O95197 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTN3O95197 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.89■□□□□ 0.62
RTN3O95197 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
RTN3O95197 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTN3O95197 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 AC132938.6-201ENST00000623828 1655 ntBASIC18.89■□□□□ 0.61
RTN3O95197 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.89■□□□□ 0.61
RTN3O95197 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.89■□□□□ 0.61
RTN3O95197 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.89■□□□□ 0.61
RTN3O95197 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 IFNL4P1-201ENST00000607083 540 ntBASIC18.89■□□□□ 0.61
RTN3O95197 AL732292.2-201ENST00000609649 430 ntBASIC18.89■□□□□ 0.61
RTN3O95197 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.89■□□□□ 0.61
RTN3O95197 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 AC138932.1-201ENST00000534164 6830 ntBASIC18.89■□□□□ 0.61
RTN3O95197 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN3O95197 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN3O95197 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.88■□□□□ 0.61
RTN3O95197 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN3O95197 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN3O95197 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RTN3O95197 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN3O95197 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN3O95197 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN3O95197 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN3O95197 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RTN3O95197 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN3O95197 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN3O95197 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms