Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.67■□□□□ 0.1
UPK1BO75841 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
UPK1BO75841 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.67■□□□□ 0.1
UPK1BO75841 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.67■□□□□ 0.1
UPK1BO75841 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.67■□□□□ 0.1
UPK1BO75841 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
UPK1BO75841 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.67■□□□□ 0.1
UPK1BO75841 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1BO75841 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1BO75841 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
UPK1BO75841 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1BO75841 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
UPK1BO75841 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
UPK1BO75841 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1BO75841 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1BO75841 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
UPK1BO75841 AL136116.3-201ENST00000402907 1138 ntBASIC15.66■□□□□ 0.1
UPK1BO75841 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1BO75841 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.66■□□□□ 0.1
UPK1BO75841 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
UPK1BO75841 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 KRT8P3-201ENST00000519669 1449 ntBASIC15.66■□□□□ 0.1
UPK1BO75841 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UPK1BO75841 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.66■□□□□ 0.1
UPK1BO75841 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
UPK1BO75841 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.65■□□□□ 0.1
UPK1BO75841 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.65■□□□□ 0.1
UPK1BO75841 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UPK1BO75841 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.65■□□□□ 0.1
UPK1BO75841 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.65■□□□□ 0.1
UPK1BO75841 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 AC073210.2-201ENST00000430369 194 ntBASIC15.65■□□□□ 0.1
UPK1BO75841 AC091305.1-201ENST00000479476 895 ntBASIC15.65■□□□□ 0.1
UPK1BO75841 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.65■□□□□ 0.1
UPK1BO75841 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.65■□□□□ 0.1
UPK1BO75841 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UPK1BO75841 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.65■□□□□ 0.1
UPK1BO75841 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.65■□□□□ 0.1
UPK1BO75841 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
UPK1BO75841 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UPK1BO75841 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UPK1BO75841 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.65■□□□□ 0.1
UPK1BO75841 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.65■□□□□ 0.1
UPK1BO75841 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms