Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.95■□□□□ 0.46
NDUFS3O75489 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.95■□□□□ 0.46
NDUFS3O75489 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NDUFS3O75489 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NDUFS3O75489 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NDUFS3O75489 AC067852.2-201ENST00000590513 2313 ntBASIC17.95■□□□□ 0.46
NDUFS3O75489 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 AC005332.8-201ENST00000622750 2735 ntBASIC17.95■□□□□ 0.46
NDUFS3O75489 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
NDUFS3O75489 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NDUFS3O75489 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 AC134043.2-201ENST00000624206 2238 ntBASIC17.94■□□□□ 0.46
NDUFS3O75489 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.94■□□□□ 0.46
NDUFS3O75489 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NDUFS3O75489 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.94■□□□□ 0.46
NDUFS3O75489 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
NDUFS3O75489 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.94■□□□□ 0.46
NDUFS3O75489 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 LINC00167-201ENST00000530583 1419 ntBASIC17.94■□□□□ 0.46
NDUFS3O75489 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NDUFS3O75489 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
NDUFS3O75489 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
NDUFS3O75489 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
NDUFS3O75489 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 GNAS-203ENST00000306120 1878 ntBASIC17.94■□□□□ 0.46
NDUFS3O75489 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.94■□□□□ 0.46
NDUFS3O75489 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDUFS3O75489 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
NDUFS3O75489 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.94■□□□□ 0.46
NDUFS3O75489 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NDUFS3O75489 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NDUFS3O75489 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NDUFS3O75489 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.93■□□□□ 0.46
NDUFS3O75489 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.93■□□□□ 0.46
NDUFS3O75489 KRT18P38-201ENST00000449496 1282 ntBASIC17.93■□□□□ 0.46
NDUFS3O75489 ZNF444P1-201ENST00000559497 298 ntBASIC17.93■□□□□ 0.46
NDUFS3O75489 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.93■□□□□ 0.46
NDUFS3O75489 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.93■□□□□ 0.46
NDUFS3O75489 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.93■□□□□ 0.46
NDUFS3O75489 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.93■□□□□ 0.46
NDUFS3O75489 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.93■□□□□ 0.46
NDUFS3O75489 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.93■□□□□ 0.46
NDUFS3O75489 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.93■□□□□ 0.46
NDUFS3O75489 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.93■□□□□ 0.46
NDUFS3O75489 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NDUFS3O75489 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.93■□□□□ 0.46
NDUFS3O75489 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.93■□□□□ 0.46
NDUFS3O75489 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.93■□□□□ 0.46
NDUFS3O75489 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NDUFS3O75489 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFS3O75489 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NDUFS3O75489 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NDUFS3O75489 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NDUFS3O75489 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDUFS3O75489 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NDUFS3O75489 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDUFS3O75489 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms