Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
GPC4O75487 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC4O75487 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GPC4O75487 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC4O75487 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC4O75487 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC4O75487 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GPC4O75487 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GPC4O75487 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC4O75487 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC4O75487 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GPC4O75487 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC4O75487 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 RNF152P1-201ENST00000397754 604 ntBASIC18.04■□□□□ 0.48
GPC4O75487 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.04■□□□□ 0.48
GPC4O75487 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.04■□□□□ 0.48
GPC4O75487 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GPC4O75487 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC4O75487 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.04■□□□□ 0.48
GPC4O75487 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC4O75487 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC4O75487 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GPC4O75487 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC4O75487 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
GPC4O75487 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC4O75487 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
GPC4O75487 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC4O75487 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GPC4O75487 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 TSPY5P-201ENST00000426936 936 ntBASIC18.03■□□□□ 0.48
GPC4O75487 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
GPC4O75487 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC4O75487 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.03■□□□□ 0.48
GPC4O75487 AL157888.1-201ENST00000631930 593 ntBASIC18.03■□□□□ 0.48
GPC4O75487 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GPC4O75487 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
GPC4O75487 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC4O75487 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC4O75487 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GPC4O75487 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC4O75487 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC4O75487 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.02■□□□□ 0.48
GPC4O75487 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
GPC4O75487 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 GNAS-203ENST00000306120 1878 ntBASIC18.02■□□□□ 0.48
GPC4O75487 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.02■□□□□ 0.48
GPC4O75487 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 AK4P3-201ENST00000418260 669 ntBASIC18.02■□□□□ 0.48
GPC4O75487 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
GPC4O75487 TMPOP1-202ENST00000424642 1267 ntBASIC18.02■□□□□ 0.48
GPC4O75487 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.02■□□□□ 0.48
GPC4O75487 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.02■□□□□ 0.48
GPC4O75487 AC034232.1-201ENST00000506026 1064 ntBASIC18.02■□□□□ 0.48
GPC4O75487 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.02■□□□□ 0.48
GPC4O75487 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC4O75487 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC4O75487 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GPC4O75487 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC4O75487 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC4O75487 AC134043.2-201ENST00000624206 2238 ntBASIC18.02■□□□□ 0.47
GPC4O75487 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC4O75487 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms