Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PFDN1O60925 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PFDN1O60925 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.08■□□□□ 0.16
PFDN1O60925 CICP14-201ENST00000629111 2732 ntBASIC16.08■□□□□ 0.16
PFDN1O60925 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN1O60925 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PFDN1O60925 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN1O60925 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.08■□□□□ 0.16
PFDN1O60925 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN1O60925 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN1O60925 MIR3181-201ENST00000578512 73 ntBASIC16.08■□□□□ 0.16
PFDN1O60925 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.08■□□□□ 0.16
PFDN1O60925 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN1O60925 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
PFDN1O60925 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.08■□□□□ 0.16
PFDN1O60925 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PFDN1O60925 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PFDN1O60925 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PFDN1O60925 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN1O60925 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PFDN1O60925 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.08■□□□□ 0.16
PFDN1O60925 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN1O60925 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PFDN1O60925 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PFDN1O60925 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN1O60925 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN1O60925 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PFDN1O60925 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.07■□□□□ 0.16
PFDN1O60925 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PFDN1O60925 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PFDN1O60925 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.07■□□□□ 0.16
PFDN1O60925 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PFDN1O60925 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PFDN1O60925 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PFDN1O60925 AC092068.3-201ENST00000587894 2016 ntBASIC16.07■□□□□ 0.16
PFDN1O60925 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.07■□□□□ 0.16
PFDN1O60925 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.07■□□□□ 0.16
PFDN1O60925 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PFDN1O60925 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PFDN1O60925 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.06■□□□□ 0.16
PFDN1O60925 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.06■□□□□ 0.16
PFDN1O60925 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PFDN1O60925 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PFDN1O60925 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.06■□□□□ 0.16
PFDN1O60925 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.06■□□□□ 0.16
PFDN1O60925 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.06■□□□□ 0.16
PFDN1O60925 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PFDN1O60925 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.06■□□□□ 0.16
PFDN1O60925 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PFDN1O60925 BX664725.1-201ENST00000438252 379 ntBASIC16.06■□□□□ 0.16
PFDN1O60925 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.06■□□□□ 0.16
PFDN1O60925 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PFDN1O60925 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PFDN1O60925 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PFDN1O60925 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN1O60925 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.05■□□□□ 0.16
PFDN1O60925 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.05■□□□□ 0.16
PFDN1O60925 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN1O60925 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN1O60925 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms