Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LCMT2O60294 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.19■□□□□ 0.34
LCMT2O60294 AC008764.6-201ENST00000595909 2069 ntBASIC17.19■□□□□ 0.34
LCMT2O60294 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LCMT2O60294 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.19■□□□□ 0.34
LCMT2O60294 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.19■□□□□ 0.34
LCMT2O60294 CHCHD2P8-201ENST00000429873 447 ntBASIC17.19■□□□□ 0.34
LCMT2O60294 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.19■□□□□ 0.34
LCMT2O60294 AC112698.1-201ENST00000510299 916 ntBASIC17.19■□□□□ 0.34
LCMT2O60294 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LCMT2O60294 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 AL592071.1-201ENST00000611956 408 ntBASIC17.19■□□□□ 0.34
LCMT2O60294 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.19■□□□□ 0.34
LCMT2O60294 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LCMT2O60294 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.19■□□□□ 0.34
LCMT2O60294 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.19■□□□□ 0.34
LCMT2O60294 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
LCMT2O60294 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
LCMT2O60294 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LCMT2O60294 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.19■□□□□ 0.34
LCMT2O60294 AC022898.2-201ENST00000616822 1312 ntBASIC17.19■□□□□ 0.34
LCMT2O60294 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
LCMT2O60294 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
LCMT2O60294 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 KRT18P55-202ENST00000578578 1546 ntBASIC17.18■□□□□ 0.34
LCMT2O60294 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LCMT2O60294 AL845331.1-201ENST00000424978 1190 ntBASIC17.18■□□□□ 0.34
LCMT2O60294 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LCMT2O60294 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.18■□□□□ 0.34
LCMT2O60294 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.18■□□□□ 0.34
LCMT2O60294 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.18■□□□□ 0.34
LCMT2O60294 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.18■□□□□ 0.34
LCMT2O60294 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.18■□□□□ 0.34
LCMT2O60294 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LCMT2O60294 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LCMT2O60294 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.17■□□□□ 0.34
LCMT2O60294 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LCMT2O60294 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LCMT2O60294 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.17■□□□□ 0.34
LCMT2O60294 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LCMT2O60294 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LCMT2O60294 KRT8P47-201ENST00000604727 1398 ntBASIC17.17■□□□□ 0.34
LCMT2O60294 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LCMT2O60294 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LCMT2O60294 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LCMT2O60294 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.17■□□□□ 0.34
LCMT2O60294 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LCMT2O60294 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
LCMT2O60294 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LCMT2O60294 UPK3BP1-201ENST00000428678 509 ntBASIC17.17■□□□□ 0.34
LCMT2O60294 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.17■□□□□ 0.34
LCMT2O60294 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.17■□□□□ 0.34
LCMT2O60294 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.17■□□□□ 0.34
LCMT2O60294 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.17■□□□□ 0.34
LCMT2O60294 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LCMT2O60294 AC069148.1-201ENST00000608741 768 ntBASIC17.17■□□□□ 0.34
LCMT2O60294 NPAP1P7-201ENST00000613027 823 ntBASIC17.17■□□□□ 0.34
LCMT2O60294 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LCMT2O60294 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.17■□□□□ 0.34
LCMT2O60294 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LCMT2O60294 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LCMT2O60294 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LCMT2O60294 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.17■□□□□ 0.34
LCMT2O60294 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LCMT2O60294 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms