Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AL032819.2-201ENST00000624543 2162 ntBASIC16.97■□□□□ 0.31
URB1O60287 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.96■□□□□ 0.31
URB1O60287 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
URB1O60287 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.96■□□□□ 0.31
URB1O60287 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.96■□□□□ 0.31
URB1O60287 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.96■□□□□ 0.31
URB1O60287 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.96■□□□□ 0.31
URB1O60287 AC011467.2-201ENST00000598425 242 ntBASIC16.96■□□□□ 0.31
URB1O60287 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 AP002414.3-201ENST00000589352 1468 ntBASIC16.96■□□□□ 0.31
URB1O60287 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
URB1O60287 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 AC068472.1-201ENST00000474589 881 ntBASIC16.96■□□□□ 0.31
URB1O60287 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.96■□□□□ 0.31
URB1O60287 KRT18P41-201ENST00000518924 1277 ntBASIC16.96■□□□□ 0.31
URB1O60287 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.96■□□□□ 0.31
URB1O60287 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.96■□□□□ 0.31
URB1O60287 AC138761.1-201ENST00000584393 385 ntBASIC16.96■□□□□ 0.31
URB1O60287 TEX21P-204ENST00000641479 1693 ntBASIC16.96■□□□□ 0.31
URB1O60287 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.96■□□□□ 0.31
URB1O60287 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.96■□□□□ 0.31
URB1O60287 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
URB1O60287 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
URB1O60287 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
URB1O60287 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
URB1O60287 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.95■□□□□ 0.3
URB1O60287 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
URB1O60287 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
URB1O60287 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.95■□□□□ 0.3
URB1O60287 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.95■□□□□ 0.3
URB1O60287 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
URB1O60287 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.95■□□□□ 0.3
URB1O60287 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.95■□□□□ 0.3
URB1O60287 C20orf181-201ENST00000623918 480 ntBASIC16.95■□□□□ 0.3
URB1O60287 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
URB1O60287 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
URB1O60287 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
URB1O60287 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.95■□□□□ 0.3
URB1O60287 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.95■□□□□ 0.3
URB1O60287 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.95■□□□□ 0.3
URB1O60287 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.95■□□□□ 0.3
URB1O60287 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.95■□□□□ 0.3
URB1O60287 AC108751.1-201ENST00000490852 363 ntBASIC16.95■□□□□ 0.3
URB1O60287 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.95■□□□□ 0.3
URB1O60287 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
URB1O60287 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.94■□□□□ 0.3
URB1O60287 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
URB1O60287 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.94■□□□□ 0.3
URB1O60287 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.94■□□□□ 0.3
URB1O60287 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.94■□□□□ 0.3
URB1O60287 BCRP1-201ENST00000444246 691 ntBASIC16.94■□□□□ 0.3
URB1O60287 AC018845.2-201ENST00000568326 409 ntBASIC16.94■□□□□ 0.3
URB1O60287 AL078644.1-201ENST00000609881 752 ntBASIC16.94■□□□□ 0.3
URB1O60287 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms