Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RIPK2O43353 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RIPK2O43353 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.26■□□□□ 0.51
RIPK2O43353 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RIPK2O43353 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.26■□□□□ 0.51
RIPK2O43353 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.26■□□□□ 0.51
RIPK2O43353 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.26■□□□□ 0.51
RIPK2O43353 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.26■□□□□ 0.51
RIPK2O43353 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RIPK2O43353 AC006058.3-201ENST00000606217 1069 ntBASIC18.26■□□□□ 0.51
RIPK2O43353 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RIPK2O43353 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RIPK2O43353 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
RIPK2O43353 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
RIPK2O43353 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RIPK2O43353 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RIPK2O43353 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RIPK2O43353 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.25■□□□□ 0.51
RIPK2O43353 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.25■□□□□ 0.51
RIPK2O43353 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.25■□□□□ 0.51
RIPK2O43353 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.25■□□□□ 0.51
RIPK2O43353 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RIPK2O43353 AC018695.7-201ENST00000624587 2492 ntBASIC18.25■□□□□ 0.51
RIPK2O43353 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RIPK2O43353 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RIPK2O43353 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.25■□□□□ 0.51
RIPK2O43353 HLA-L-209ENST00000420110 1011 ntBASIC18.25■□□□□ 0.51
RIPK2O43353 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.25■□□□□ 0.51
RIPK2O43353 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.25■□□□□ 0.51
RIPK2O43353 AC116562.2-201ENST00000507042 360 ntBASIC18.25■□□□□ 0.51
RIPK2O43353 AC097488.1-201ENST00000507834 756 ntBASIC18.25■□□□□ 0.51
RIPK2O43353 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.25■□□□□ 0.51
RIPK2O43353 MIR3180-4-201ENST00000582223 153 ntBASIC18.25■□□□□ 0.51
RIPK2O43353 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.25■□□□□ 0.51
RIPK2O43353 AC106886.4-201ENST00000623557 2502 ntBASIC18.25■□□□□ 0.51
RIPK2O43353 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RIPK2O43353 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.24■□□□□ 0.51
RIPK2O43353 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.24■□□□□ 0.51
RIPK2O43353 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RIPK2O43353 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RIPK2O43353 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RIPK2O43353 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
RIPK2O43353 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.24■□□□□ 0.51
RIPK2O43353 AC104390.1-201ENST00000555663 520 ntBASIC18.24■□□□□ 0.51
RIPK2O43353 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.24■□□□□ 0.51
RIPK2O43353 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.24■□□□□ 0.51
RIPK2O43353 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.24■□□□□ 0.51
RIPK2O43353 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 CR769767.2-201ENST00000622735 460 ntBASIC18.24■□□□□ 0.51
RIPK2O43353 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.24■□□□□ 0.51
RIPK2O43353 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.24■□□□□ 0.51
RIPK2O43353 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.24■□□□□ 0.51
RIPK2O43353 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.24■□□□□ 0.51
RIPK2O43353 UBALD1-205ENST00000590891 2641 ntBASIC18.24■□□□□ 0.51
RIPK2O43353 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
RIPK2O43353 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RIPK2O43353 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RIPK2O43353 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
RIPK2O43353 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RIPK2O43353 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RIPK2O43353 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.23■□□□□ 0.51
RIPK2O43353 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms