Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AC006116.8-202ENST00000587620 1550 ntBASIC19.33■□□□□ 0.68
CEP290O15078 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 RPS15P9-201ENST00000494093 319 ntBASIC19.32■□□□□ 0.68
CEP290O15078 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.32■□□□□ 0.68
CEP290O15078 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CEP290O15078 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CEP290O15078 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CEP290O15078 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.32■□□□□ 0.68
CEP290O15078 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.32■□□□□ 0.68
CEP290O15078 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.32■□□□□ 0.68
CEP290O15078 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CEP290O15078 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CEP290O15078 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.32■□□□□ 0.68
CEP290O15078 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 SLC25A39P2-201ENST00000537614 270 ntBASIC19.32■□□□□ 0.68
CEP290O15078 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.32■□□□□ 0.68
CEP290O15078 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.32■□□□□ 0.68
CEP290O15078 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.32■□□□□ 0.68
CEP290O15078 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CEP290O15078 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CEP290O15078 AC005082.1-201ENST00000413042 2259 ntBASIC19.31■□□□□ 0.68
CEP290O15078 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.31■□□□□ 0.68
CEP290O15078 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.31■□□□□ 0.68
CEP290O15078 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.31■□□□□ 0.68
CEP290O15078 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.31■□□□□ 0.68
CEP290O15078 AC099522.2-201ENST00000607001 744 ntBASIC19.31■□□□□ 0.68
CEP290O15078 REXO1L3P-201ENST00000622202 1288 ntBASIC19.31■□□□□ 0.68
CEP290O15078 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.31■□□□□ 0.68
CEP290O15078 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.31■□□□□ 0.68
CEP290O15078 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
CEP290O15078 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CEP290O15078 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CEP290O15078 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.31■□□□□ 0.68
CEP290O15078 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.31■□□□□ 0.68
CEP290O15078 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.31■□□□□ 0.68
CEP290O15078 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEP290O15078 FEM1AP3-201ENST00000403722 1741 ntBASIC19.3■□□□□ 0.68
CEP290O15078 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.3■□□□□ 0.68
CEP290O15078 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 AL592309.1-201ENST00000443127 649 ntBASIC19.3■□□□□ 0.68
CEP290O15078 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.3■□□□□ 0.68
CEP290O15078 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.3■□□□□ 0.68
CEP290O15078 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.3■□□□□ 0.68
CEP290O15078 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.3■□□□□ 0.68
CEP290O15078 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
CEP290O15078 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CEP290O15078 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CEP290O15078 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.3■□□□□ 0.68
CEP290O15078 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.3■□□□□ 0.68
CEP290O15078 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.3■□□□□ 0.68
CEP290O15078 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CEP290O15078 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.3■□□□□ 0.68
CEP290O15078 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 AC008677.1-201ENST00000519230 1561 ntBASIC19.3■□□□□ 0.68
CEP290O15078 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CEP290O15078 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEP290O15078 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CEP290O15078 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.29■□□□□ 0.68
CEP290O15078 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEP290O15078 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.29■□□□□ 0.68
CEP290O15078 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEP290O15078 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.29■□□□□ 0.68
CEP290O15078 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEP290O15078 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.29■□□□□ 0.68
CEP290O15078 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms