Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.52■□□□□ 0.87
ATP2A1O14983 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP2A1O14983 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP2A1O14983 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.52■□□□□ 0.87
ATP2A1O14983 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP2A1O14983 BX323043.1-201ENST00000641006 1765 ntBASIC20.51■□□□□ 0.87
ATP2A1O14983 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A1O14983 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP2A1O14983 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A1O14983 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATP2A1O14983 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2A1O14983 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATP2A1O14983 KRT18P58-201ENST00000527480 1120 ntBASIC20.51■□□□□ 0.87
ATP2A1O14983 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2A1O14983 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATP2A1O14983 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A1O14983 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ATP2A1O14983 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ATP2A1O14983 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
ATP2A1O14983 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A1O14983 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A1O14983 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ATP2A1O14983 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ATP2A1O14983 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2A1O14983 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
ATP2A1O14983 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP2A1O14983 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
ATP2A1O14983 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.5■□□□□ 0.87
ATP2A1O14983 RPL13AP23-201ENST00000480739 586 ntBASIC20.5■□□□□ 0.87
ATP2A1O14983 IGHV3-22-201ENST00000520721 359 ntBASIC20.5■□□□□ 0.87
ATP2A1O14983 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP2A1O14983 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.5■□□□□ 0.87
ATP2A1O14983 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP2A1O14983 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.5■□□□□ 0.87
ATP2A1O14983 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
ATP2A1O14983 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A1O14983 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
ATP2A1O14983 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ATP2A1O14983 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ATP2A1O14983 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ATP2A1O14983 KRT8P47-201ENST00000604727 1398 ntBASIC20.49■□□□□ 0.87
ATP2A1O14983 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
ATP2A1O14983 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
ATP2A1O14983 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ATP2A1O14983 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.49■□□□□ 0.87
ATP2A1O14983 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.49■□□□□ 0.87
ATP2A1O14983 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP2A1O14983 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.49■□□□□ 0.87
ATP2A1O14983 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 AC145285.3-201ENST00000564603 959 ntBASIC20.49■□□□□ 0.87
ATP2A1O14983 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.49■□□□□ 0.87
ATP2A1O14983 NKAPP1-205ENST00000585790 367 ntBASIC20.49■□□□□ 0.87
ATP2A1O14983 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.49■□□□□ 0.87
ATP2A1O14983 GPALPP1-207ENST00000611650 899 ntBASIC20.49■□□□□ 0.87
ATP2A1O14983 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.49■□□□□ 0.87
ATP2A1O14983 AD001527.2-201ENST00000622994 785 ntBASIC20.49■□□□□ 0.87
ATP2A1O14983 AC073592.4-201ENST00000623827 446 ntBASIC20.49■□□□□ 0.87
ATP2A1O14983 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 PMPCAP1-201ENST00000508114 1576 ntBASIC20.49■□□□□ 0.87
ATP2A1O14983 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 AC120498.9-201ENST00000339021 3867 ntBASIC20.49■□□□□ 0.87
ATP2A1O14983 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ATP2A1O14983 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP2A1O14983 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A1O14983 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ATP2A1O14983 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ATP2A1O14983 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ATP2A1O14983 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms