Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL21O00585 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.8■□□□□ 0.12
CCL21O00585 LINC02084-201ENST00000606069 1096 ntBASIC15.8■□□□□ 0.12
CCL21O00585 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL21O00585 AC005082.1-201ENST00000413042 2259 ntBASIC15.8■□□□□ 0.12
CCL21O00585 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL21O00585 AC004817.3-201ENST00000602957 2129 ntBASIC15.8■□□□□ 0.12
CCL21O00585 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL21O00585 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL21O00585 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL21O00585 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL21O00585 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL21O00585 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 GMCL1P1-201ENST00000463439 1581 ntBASIC15.79■□□□□ 0.12
CCL21O00585 PMPCAP1-201ENST00000508114 1576 ntBASIC15.79■□□□□ 0.12
CCL21O00585 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCL21O00585 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL21O00585 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCL21O00585 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL21O00585 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL21O00585 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL21O00585 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.79■□□□□ 0.12
CCL21O00585 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.79■□□□□ 0.12
CCL21O00585 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.79■□□□□ 0.12
CCL21O00585 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.79■□□□□ 0.12
CCL21O00585 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.79■□□□□ 0.12
CCL21O00585 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.79■□□□□ 0.12
CCL21O00585 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.79■□□□□ 0.12
CCL21O00585 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL21O00585 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.79■□□□□ 0.12
CCL21O00585 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL21O00585 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL21O00585 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCL21O00585 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCL21O00585 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.79■□□□□ 0.12
CCL21O00585 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL21O00585 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.78■□□□□ 0.12
CCL21O00585 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL21O00585 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL21O00585 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CCL21O00585 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCL21O00585 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 KRT18P27-201ENST00000427733 1299 ntBASIC15.78■□□□□ 0.12
CCL21O00585 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.78■□□□□ 0.12
CCL21O00585 SNHG9-202ENST00000564014 471 ntBASIC15.78■□□□□ 0.12
CCL21O00585 AC005829.1-201ENST00000570002 483 ntBASIC15.78■□□□□ 0.12
CCL21O00585 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.78■□□□□ 0.12
CCL21O00585 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.78■□□□□ 0.12
CCL21O00585 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL21O00585 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.78■□□□□ 0.12
CCL21O00585 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.78■□□□□ 0.12
CCL21O00585 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL21O00585 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.78■□□□□ 0.12
CCL21O00585 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL21O00585 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CCL21O00585 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL21O00585 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CCL21O00585 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.77■□□□□ 0.12
CCL21O00585 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CCL21O00585 KRT18P28-201ENST00000453838 1332 ntBASIC15.77■□□□□ 0.12
CCL21O00585 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCL21O00585 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CCL21O00585 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.77■□□□□ 0.12
CCL21O00585 PRYP5-201ENST00000451909 266 ntBASIC15.77■□□□□ 0.12
CCL21O00585 AC122714.2-201ENST00000502787 707 ntBASIC15.77■□□□□ 0.12
CCL21O00585 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
CCL21O00585 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.77■□□□□ 0.12
CCL21O00585 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.77■□□□□ 0.12
CCL21O00585 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.77■□□□□ 0.12
CCL21O00585 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCL21O00585 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
CCL21O00585 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
CCL21O00585 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCL21O00585 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.77■□□□□ 0.11
CCL21O00585 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCL21O00585 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.76■□□□□ 0.11
CCL21O00585 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.76■□□□□ 0.11
CCL21O00585 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms