Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN5O00501 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN5O00501 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN5O00501 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN5O00501 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 AC091304.2-201ENST00000564639 760 ntBASIC18.94■□□□□ 0.62
CLDN5O00501 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN5O00501 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN5O00501 IFNL4P1-201ENST00000607083 540 ntBASIC18.94■□□□□ 0.62
CLDN5O00501 AL121772.3-201ENST00000610840 674 ntBASIC18.94■□□□□ 0.62
CLDN5O00501 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN5O00501 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN5O00501 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN5O00501 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.94■□□□□ 0.62
CLDN5O00501 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN5O00501 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN5O00501 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLDN5O00501 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CLDN5O00501 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN5O00501 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLDN5O00501 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN5O00501 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLDN5O00501 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 AL354751.1-201ENST00000412768 1863 ntBASIC18.93■□□□□ 0.62
CLDN5O00501 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLDN5O00501 TP73-AS1-210ENST00000637775 1455 ntBASIC18.93■□□□□ 0.62
CLDN5O00501 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 RCN1P2-201ENST00000398357 915 ntBASIC18.93■□□□□ 0.62
CLDN5O00501 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN5O00501 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN5O00501 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN5O00501 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN5O00501 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN5O00501 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLDN5O00501 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN5O00501 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN5O00501 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN5O00501 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CLDN5O00501 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN5O00501 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CLDN5O00501 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN5O00501 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLDN5O00501 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLDN5O00501 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN5O00501 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN5O00501 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN5O00501 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.92■□□□□ 0.62
CLDN5O00501 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN5O00501 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.92■□□□□ 0.62
CLDN5O00501 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN5O00501 AC022898.2-201ENST00000616822 1312 ntBASIC18.92■□□□□ 0.62
CLDN5O00501 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLDN5O00501 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLDN5O00501 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLDN5O00501 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN5O00501 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLDN5O00501 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLDN5O00501 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLDN5O00501 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN5O00501 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN5O00501 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms