Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TNFRSF11BO00300 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF11BO00300 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF11BO00300 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF11BO00300 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TNFRSF11BO00300 AL024508.2-201ENST00000607749 1894 ntBASIC16.65■□□□□ 0.26
TNFRSF11BO00300 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF11BO00300 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF11BO00300 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF11BO00300 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF11BO00300 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 DUTP2-201ENST00000519164 463 ntBASIC16.64■□□□□ 0.25
TNFRSF11BO00300 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF11BO00300 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 AC116562.2-201ENST00000507042 360 ntBASIC16.63■□□□□ 0.25
TNFRSF11BO00300 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 NKILA-202ENST00000614771 2598 ntBASIC16.63■□□□□ 0.25
TNFRSF11BO00300 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF11BO00300 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 CROCCP2-202ENST00000412962 2773 ntBASIC16.62■□□□□ 0.25
TNFRSF11BO00300 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 CRYGFP-201ENST00000418459 633 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms