Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
USP27XA6NNY8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 HLA-J-201ENST00000462773 1622 ntBASIC19.41■□□□□ 0.7
USP27XA6NNY8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 NIFKP9-201ENST00000419265 221 ntBASIC19.41■□□□□ 0.7
USP27XA6NNY8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
USP27XA6NNY8 KRT16P5-201ENST00000455284 522 ntBASIC19.41■□□□□ 0.7
USP27XA6NNY8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.41■□□□□ 0.7
USP27XA6NNY8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.41■□□□□ 0.7
USP27XA6NNY8 AC011298.2-201ENST00000617989 482 ntBASIC19.41■□□□□ 0.7
USP27XA6NNY8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.41■□□□□ 0.7
USP27XA6NNY8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
USP27XA6NNY8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.41■□□□□ 0.7
USP27XA6NNY8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 AC036111.1-201ENST00000533973 1582 ntBASIC19.4■□□□□ 0.7
USP27XA6NNY8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 AL596257.1-201ENST00000641463 2694 ntBASIC19.4■□□□□ 0.7
USP27XA6NNY8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 LINC00554-201ENST00000564841 3011 ntBASIC19.4■□□□□ 0.7
USP27XA6NNY8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP27XA6NNY8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.4■□□□□ 0.7
USP27XA6NNY8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
USP27XA6NNY8 REXO1L11P-201ENST00000620964 1927 ntBASIC19.39■□□□□ 0.7
USP27XA6NNY8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP27XA6NNY8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP27XA6NNY8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP27XA6NNY8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP27XA6NNY8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP27XA6NNY8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP27XA6NNY8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP27XA6NNY8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP27XA6NNY8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP27XA6NNY8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
USP27XA6NNY8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP27XA6NNY8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP27XA6NNY8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP27XA6NNY8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP27XA6NNY8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP27XA6NNY8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP27XA6NNY8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 HLA-L-209ENST00000420110 1011 ntBASIC19.38■□□□□ 0.69
USP27XA6NNY8 NCF1B-203ENST00000435988 1254 ntBASIC19.38■□□□□ 0.69
USP27XA6NNY8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.38■□□□□ 0.69
USP27XA6NNY8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP27XA6NNY8 AC079328.2-201ENST00000561241 3354 ntBASIC19.38■□□□□ 0.69
USP27XA6NNY8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 AL023875.1-201ENST00000640777 796 ntBASIC19.38■□□□□ 0.69
USP27XA6NNY8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP27XA6NNY8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
USP27XA6NNY8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.38■□□□□ 0.69
USP27XA6NNY8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms