Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP17L4A6NCW7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP17L4A6NCW7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.58■■□□□ 1.05
USP17L4A6NCW7 PRYP5-201ENST00000451909 266 ntBASIC21.58■■□□□ 1.05
USP17L4A6NCW7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.58■■□□□ 1.05
USP17L4A6NCW7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
USP17L4A6NCW7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.58■■□□□ 1.05
USP17L4A6NCW7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
USP17L4A6NCW7 MIR1199-201ENST00000621445 119 ntBASIC21.58■■□□□ 1.05
USP17L4A6NCW7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.58■■□□□ 1.05
USP17L4A6NCW7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
USP17L4A6NCW7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
USP17L4A6NCW7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
USP17L4A6NCW7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
USP17L4A6NCW7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.58■■□□□ 1.04
USP17L4A6NCW7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
USP17L4A6NCW7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 RPS8P6-201ENST00000426177 609 ntBASIC21.57■■□□□ 1.04
USP17L4A6NCW7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 AC002347.1-201ENST00000569543 541 ntBASIC21.57■■□□□ 1.04
USP17L4A6NCW7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.57■■□□□ 1.04
USP17L4A6NCW7 AC006557.2-201ENST00000592985 1240 ntBASIC21.57■■□□□ 1.04
USP17L4A6NCW7 AC004817.3-201ENST00000602957 2129 ntBASIC21.57■■□□□ 1.04
USP17L4A6NCW7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.57■■□□□ 1.04
USP17L4A6NCW7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AC073621.1-201ENST00000392730 636 ntBASIC21.56■■□□□ 1.04
USP17L4A6NCW7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AC005593.1-201ENST00000624894 515 ntBASIC21.56■■□□□ 1.04
USP17L4A6NCW7 PGM5P2-202ENST00000637225 1043 ntBASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AC079781.4-201ENST00000641908 219 ntBASIC21.56■■□□□ 1.04
USP17L4A6NCW7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 ESPNP-201ENST00000270691 2015 ntBASIC21.56■■□□□ 1.04
USP17L4A6NCW7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP17L4A6NCW7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 AC023274.1-201ENST00000418278 595 ntBASIC21.55■■□□□ 1.04
USP17L4A6NCW7 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.55■■□□□ 1.04
USP17L4A6NCW7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 AC004967.1-201ENST00000453589 447 ntBASIC21.55■■□□□ 1.04
USP17L4A6NCW7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
USP17L4A6NCW7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms