Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 AL024508.2-201ENST00000607749 1894 ntBASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 AP003071.4-201ENST00000562276 1284 ntBASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 AC112497.1-201ENST00000624824 639 ntBASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 AC092338.2-201ENST00000568827 1415 ntBASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 AL162727.3-201ENST00000635661 2787 ntBASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV6-7A0A0A0MS04 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 AL391005.1-201ENST00000623953 2435 ntBASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 AC011270.2-201ENST00000624293 2550 ntBASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRBV6-7A0A0A0MS04 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 UNC93B2-201ENST00000285383 730 ntBASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 CCR12P-201ENST00000446203 998 ntBASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 BX088651.1-201ENST00000540551 451 ntBASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRBV6-7A0A0A0MS04 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms