Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV1A0A0A0MS02 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRGV1A0A0A0MS02 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
TRGV1A0A0A0MS02 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 AL023973.1-201ENST00000624619 620 ntBASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 AL157888.1-201ENST00000631930 593 ntBASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRGV1A0A0A0MS02 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 LINC01126-201ENST00000623515 1646 ntBASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 AC113347.1-201ENST00000413321 391 ntBASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 COX11P1-201ENST00000489116 835 ntBASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 AC010203.1-204ENST00000548782 407 ntBASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 GCSHP2-201ENST00000560971 527 ntBASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 AC008687.5-201ENST00000593746 558 ntBASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 AL031432.5-201ENST00000641059 760 ntBASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 FLJ13224-201ENST00000313737 1514 ntBASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.07□□□□□ -0.32
TRGV1A0A0A0MS02 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 AL024508.2-201ENST00000607749 1894 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms