Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 AC246785.2-201ENST00000432512 513 ntBASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 PRELID1P1-202ENST00000567272 903 ntBASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 RN7SL510P-201ENST00000581311 263 ntBASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 AC024563.2-201ENST00000603282 481 ntBASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 Z83836.1-201ENST00000624605 1642 ntBASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AC012313.1-201ENST00000593393 3059 ntBASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AC090164.3-201ENST00000610780 2143 ntBASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AC011270.2-201ENST00000624293 2550 ntBASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AL139384.1-201ENST00000612143 3047 ntBASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AL845331.1-201ENST00000424978 1190 ntBASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 CHCHD2P8-201ENST00000429873 447 ntBASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AC009065.1-201ENST00000564055 1225 ntBASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AC005332.3-201ENST00000589904 676 ntBASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 AC004263.2-201ENST00000617183 678 ntBASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HRH3Q9Y5N1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 AC135776.1-201ENST00000319817 2481 ntBASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms