Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 AC010460.3-201ENST00000511359 1579 ntBASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN16Q9Y5I7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLDN16Q9Y5I7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.71■□□□□ 0.26
CLDN16Q9Y5I7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 AC008764.6-201ENST00000595909 2069 ntBASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 AC009949.1-201ENST00000623048 1830 ntBASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CLDN16Q9Y5I7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 TSPY19P-201ENST00000418461 509 ntBASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 TSPY18P-201ENST00000441642 509 ntBASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 AC099336.1-202ENST00000602961 463 ntBASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN16Q9Y5I7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 TP73-AS1-210ENST00000637775 1455 ntBASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 AC007967.3-201ENST00000434308 558 ntBASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 SLC25A6P5-201ENST00000435663 894 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms