Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 AC117947.1-201ENST00000427448 529 ntBASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 AC022616.7-201ENST00000525383 220 ntBASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGB3Q9Y5G1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 NTF6B-201ENST00000591913 560 ntBASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGB3Q9Y5G1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 TSPY5P-201ENST00000426936 936 ntBASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 HOMER2P1-201ENST00000455653 964 ntBASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 YBX1P2-201ENST00000489612 999 ntBASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 NEK4P2-201ENST00000580004 1012 ntBASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGB3Q9Y5G1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms