Protein–RNA interactions for Protein: Q9Y2K5

R3HDM2, R3H domain-containing protein 2, humanhuman

Known RBP Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2Q9Y2K5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 LINC00602-201ENST00000629776 2065 ntBASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3HDM2Q9Y2K5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 AL596275.1-201ENST00000423464 877 ntBASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 ECEL1P3-201ENST00000427961 737 ntBASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 NEK4P2-201ENST00000580004 1012 ntBASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 AC092865.7-201ENST00000641832 219 ntBASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 AC009053.2-201ENST00000563701 2365 ntBASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HDM2Q9Y2K5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
R3HDM2Q9Y2K5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 PVRIG2P-201ENST00000435460 978 ntBASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HDM2Q9Y2K5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms