Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 TSPY22P-201ENST00000427496 604 ntBASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 HCG4P8-203ENST00000443049 980 ntBASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPH3AQ9Y2J0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RPH3AQ9Y2J0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPH3AQ9Y2J0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
RPH3AQ9Y2J0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPH3AQ9Y2J0 AC005332.8-201ENST00000622750 2735 ntBASIC16.52■□□□□ 0.23
RPH3AQ9Y2J0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPH3AQ9Y2J0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPH3AQ9Y2J0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 BX276092.5-203ENST00000456199 560 ntBASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 AC069148.1-201ENST00000608741 768 ntBASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPH3AQ9Y2J0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 GPR32P1-201ENST00000601788 811 ntBASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPH3AQ9Y2J0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPH3AQ9Y2J0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms