Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 KRT18P65-201ENST00000439811 1286 ntBASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 LINC00602-201ENST00000629776 2065 ntBASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS9D1Q9Y2B5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 SPDYE15P-201ENST00000424157 909 ntBASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS9D1Q9Y2B5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 AC134043.2-201ENST00000624206 2238 ntBASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms