Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 EMBP1-201ENST00000458200 901 ntBASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 Z69720.1-201ENST00000601483 472 ntBASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 AC233702.3-201ENST00000578656 1387 ntBASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 KRT18P31-201ENST00000506277 1292 ntBASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 AC099336.1-202ENST00000602961 463 ntBASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 AL592071.1-201ENST00000611956 408 ntBASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 KRT8P10-201ENST00000450021 1447 ntBASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPA1Q9UND3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 MYLKP1-201ENST00000509077 1580 ntBASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 AP000593.1-201ENST00000393668 712 ntBASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 FDX1P1-201ENST00000449115 551 ntBASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 AL353692.3-201ENST00000407031 1396 ntBASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NPIPA1Q9UND3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms