Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 AL732292.2-201ENST00000609649 430 ntBASIC20.69■□□□□ 0.9
DDX41Q9UJV9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.69■□□□□ 0.9
DDX41Q9UJV9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 AC233702.3-201ENST00000578656 1387 ntBASIC20.69■□□□□ 0.9
DDX41Q9UJV9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX41Q9UJV9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 FOSL1P1-201ENST00000511041 816 ntBASIC20.68■□□□□ 0.9
DDX41Q9UJV9 GUSBP12-201ENST00000513727 720 ntBASIC20.68■□□□□ 0.9
DDX41Q9UJV9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 AL592071.1-201ENST00000611956 408 ntBASIC20.68■□□□□ 0.9
DDX41Q9UJV9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 AC124864.1-201ENST00000623408 392 ntBASIC20.68■□□□□ 0.9
DDX41Q9UJV9 AC124067.4-201ENST00000519691 2379 ntBASIC20.68■□□□□ 0.9
DDX41Q9UJV9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX41Q9UJV9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 IFNL4P1-201ENST00000607083 540 ntBASIC20.67■□□□□ 0.9
DDX41Q9UJV9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX41Q9UJV9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 AC004870.1-201ENST00000315132 882 ntBASIC20.66■□□□□ 0.9
DDX41Q9UJV9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 MIR149-201ENST00000384879 89 ntBASIC20.66■□□□□ 0.9
DDX41Q9UJV9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 AC246785.2-201ENST00000432512 513 ntBASIC20.66■□□□□ 0.9
DDX41Q9UJV9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 AC104819.1-201ENST00000504587 486 ntBASIC20.66■□□□□ 0.9
DDX41Q9UJV9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 AC074051.2-201ENST00000565115 352 ntBASIC20.66■□□□□ 0.9
DDX41Q9UJV9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX41Q9UJV9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms