Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 AC116407.4-201ENST00000623319 1061 ntBASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PPARGC1AQ9UBK2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 AC093677.2-201ENST00000600169 1863 ntBASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 IGHGP-201ENST00000390555 1178 ntBASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 PCED1CP-201ENST00000419887 785 ntBASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPARGC1AQ9UBK2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 AC067852.2-201ENST00000590513 2313 ntBASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPARGC1AQ9UBK2 PHGDH-209ENST00000641074 1780 ntBASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms