Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 AL096828.2-201ENST00000567259 1965 ntBASIC20.63■□□□□ 0.89
FBXO28Q9NVF7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FBXO28Q9NVF7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 AL139288.1-201ENST00000623748 933 ntBASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FBXO28Q9NVF7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 AC004817.3-201ENST00000602957 2129 ntBASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 MIR940-201ENST00000401276 94 ntBASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 BX005266.1-201ENST00000473402 457 ntBASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 IGHV3-22-201ENST00000520721 359 ntBASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 OR7E14P-202ENST00000530490 1290 ntBASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 MTDHP4-201ENST00000600287 670 ntBASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 GPALPP1-207ENST00000611650 899 ntBASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 AC093677.2-201ENST00000600169 1863 ntBASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.6■□□□□ 0.89
FBXO28Q9NVF7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 AC135776.1-201ENST00000319817 2481 ntBASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 AC092910.1-201ENST00000482027 1129 ntBASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 DUTP2-201ENST00000519164 463 ntBASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 KRT18P58-201ENST00000527480 1120 ntBASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 PMPCAP1-201ENST00000508114 1576 ntBASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FBXO28Q9NVF7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms