Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 AC098934.4-201ENST00000564127 592 ntBASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
SND1-IT1Q9HBX3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SND1-IT1Q9HBX3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
SND1-IT1Q9HBX3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SND1-IT1Q9HBX3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
SND1-IT1Q9HBX3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 AL121761.2-201ENST00000598007 1648 ntBASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 AP001094.4-201ENST00000579008 2176 ntBASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 RCC2P3-201ENST00000418112 1537 ntBASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 HTR7P1-201ENST00000538670 1336 ntBASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 AL118508.1-201ENST00000613502 2345 ntBASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SND1-IT1Q9HBX3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms