Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NELFAQ9H3P2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 ZNF444P1-201ENST00000559497 298 ntBASIC16.06■□□□□ 0.16
NELFAQ9H3P2 AC087388.1-201ENST00000571370 1112 ntBASIC16.06■□□□□ 0.16
NELFAQ9H3P2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NELFAQ9H3P2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 FLJ13224-201ENST00000313737 1514 ntBASIC16.05■□□□□ 0.16
NELFAQ9H3P2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 AL121956.5-201ENST00000625261 221 ntBASIC16.05■□□□□ 0.16
NELFAQ9H3P2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 AC093010.1-201ENST00000473625 1624 ntBASIC16.05■□□□□ 0.16
NELFAQ9H3P2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NELFAQ9H3P2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFAQ9H3P2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms